geneViz_extrCDS {GenVisR} | R Documentation

## Extract CDS

### Description

Extract CDS coordinates within a GRanges object given a transcription database

### Usage

    geneViz_extrCDS(txdb = NULL, gr = NULL, reduce = FALSE, gaps = FALSE)

### Arguments

`txdb` | A TxDb object for a genome
`gr` | A Granges object specifying the region of interest
`reduce` | Boolean specifying whether to collapse isoforms
`gaps` | Boolean specifying whether to report space between CDS instead of CDS

### Value

Object of class Granges list

[Package GenVisR version 1.8.1 Index]