lohView_qual {GenVisR} | R Documentation

## check input to lohView

### Description

Perform a data quality check for inputs to lohView

### Usage

    lohView_qual(x, y, genome)

### Arguments

`x` | object of class data frame with rows representing germline calls. The data frame must contain columns with the following names "chromosome", "position", "n_vaf", "t_vaf", "sample".
`y` | a data frame with columns "chrom", "chromStart", "chromEnd", "name", "gieStain"
`genome` | character string specifying UCSC genome to use

### Value

a list of data frames passing quality checks

[Package GenVisR version 1.8.1 Index]