# co-expression of lincRNAs and protein-coding genes

## Documentation for package ‘LINC’ version 1.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

+ | Plus Operator '+' In 'LINC'
+-method | Plus Operator '+' In 'LINC'
+-methods | Plus Operator '+' In 'LINC'
Arith | Plus Operator '+' In 'LINC'
assignment | Methods for the Getter Function 'assignment' in Package 'LINC'
assignment-method | Methods for the Getter Function 'assignment' in Package 'LINC'
assignment-methods | Methods for the Getter Function 'assignment' in Package 'LINC'
BRAIN_EXPR | mRNA Expression Of Normal BRAIN From GTEX And TCGA
cerebellum | mRNA Expression Of Normal BRAIN From GTEX And TCGA
changeOrgDb | Change the Gene Annotation / Model Organism
clusterlinc | Cluster Queried ncRNAs Based On Their Interaction Partners
clusterlinc-method | Cluster Queried ncRNAs Based On Their Interaction Partners
clusterlinc-methods | Cluster Queried ncRNAs Based On Their Interaction Partners
correlation | Methods for the Getter Function 'correlation' in Package 'LINC'
correlation-method | Methods for the Getter Function 'correlation' in Package 'LINC'
correlation-methods | Methods for the Getter Function 'correlation' in Package 'LINC'
cortex | mRNA Expression Of Normal BRAIN From GTEX And TCGA
crbl_cc | mRNA Expression Of Normal BRAIN From GTEX And TCGA
crbl_cluster | mRNA Expression Of Normal BRAIN From GTEX And TCGA
crbl_matrix | mRNA Expression Of Normal BRAIN From GTEX And TCGA
ctx_cc | mRNA Expression Of Normal BRAIN From GTEX And TCGA
ctx_cluster | mRNA Expression Of Normal BRAIN From GTEX And TCGA
express | Methods for the Getter Function 'express' in Package 'LINC'
express-method | Methods for the Getter Function 'express' in Package 'LINC'
express-methods | Methods for the Getter Function 'express' in Package 'LINC'
feature | Manipulate Objects Of The 'LINC' class
gbm_cluster | mRNA Expression Of Normal BRAIN From GTEX And TCGA
getbio | Find Enriched Biological Terms For A Cluster
getbio-method | Find Enriched Biological Terms For A Cluster
getbio-methods | Find Enriched Biological Terms For A Cluster
getcoexpr | Get IDs For Co-Expressed Genes from The 'LINC' Class
getlinc | Subsetting for 'LINC' objects
getlinc-method | Subsetting for 'LINC' objects
getlinc-methods | Subsetting for 'LINC' objects
glioblastoma | mRNA Expression Of Normal BRAIN From GTEX And TCGA
hippocampus | mRNA Expression Of Normal BRAIN From GTEX And TCGA
history | Methods for the Getter Function 'history' in Package 'LINC'
history-method | Methods for the Getter Function 'history' in Package 'LINC'
history-methods | Methods for the Getter Function 'history' in Package 'LINC'
hpc_cluster | mRNA Expression Of Normal BRAIN From GTEX And TCGA
justlinc | Co-Expression Analysis Of ncRNA Genes In One Step
justlinc-method | Co-Expression Analysis Of ncRNA Genes In One Step
justlinc-methods | Co-Expression Analysis Of ncRNA Genes In One Step
linc | Compute A Correlation Matrix of Co-expressed Coding And Non-Coding Genes
linc-method | Compute A Correlation Matrix of Co-expressed Coding And Non-Coding Genes
linc-methods | Compute A Correlation Matrix of Co-expressed Coding And Non-Coding Genes
LINCbio-class | Class '"LINCbio"'
LINCcluster-class | Class '"LINCcluster"'
linCenvir | Methods for the Getter Function 'linCenvir' in Package 'LINC'
linCenvir-method | Methods for the Getter Function 'linCenvir' in Package 'LINC'
linCenvir-methods | Methods for the Getter Function 'linCenvir' in Package 'LINC'
LINCfeature-class | Class '"LINCfeature"'
LINCmatrix-class | Class '"LINCmatrix"'
LINCsingle-class | Class '"LINCsingle"'
linctable | Write To Table 'LINC'
linctable-method | Write To Table 'LINC'
linctable-methods | Write To Table 'LINC'
pcgenes_crbl | mRNA Expression Of Normal BRAIN From GTEX And TCGA
pcgenes_ctx | mRNA Expression Of Normal BRAIN From GTEX And TCGA
pcgenes_gbm | mRNA Expression Of Normal BRAIN From GTEX And TCGA
pcgenes_hpc | mRNA Expression Of Normal BRAIN From GTEX And TCGA
plotlinc | Plot Objects Of The 'LINC' class
plotlinc-method | Plot Objects Of The 'LINC' class
plotlinc-methods | Plot Objects Of The 'LINC' class
querycluster | Cluster One ncRNA Gene Based On Its Co-Expression in Multiple Datasets
results | Methods for the Getter Function 'results' in Package 'LINC'
results-method | Methods for the Getter Function 'results' in Package 'LINC'
results-methods | Methods for the Getter Function 'results' in Package 'LINC'
singlelinc | Co-Expression Analysis Of A Single ncRNA Gene
singlelinc-method | Co-Expression Analysis Of A Single ncRNA Gene
singlelinc-methods | Co-Expression Analysis Of A Single ncRNA Gene