# LVS normalization for Agilent miRNA data

## Documentation for package ‘LVSmiRNA’ version 1.28.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

boxplot-method | Methods for Function boxplot
boxplot-methods | Methods for Function boxplot
estVC | Robust Linear Model to Estimate Residual Variance and Array Effect
estVC.EList | Robust Linear Model to Estimate Residual Variance and Array Effect
estVC.RGList | Robust Linear Model to Estimate Residual Variance and Array Effect
exprs-method | Methods for Function exprs
exprs-methods | Methods for Function exprs
exprs<--method | ~~ Methods for Function exprs<- in Package 'Biobase' ~~
exprs<--methods | ~~ Methods for Function exprs<- in Package 'Biobase' ~~
featureNames-method | Methods for Function featureNames
featureNames-methods | Methods for Function featureNames
lvs | Least Variant Set selection and Normalization Function(s)
lvs.EList | Least Variant Set selection and Normalization Function(s)
lvs.RGList | Least Variant Set selection and Normalization Function(s)
MIR | Data example
MIR-spike-in | Data example
MIR.RA | Data example
MIR_RA | Data example
normalize.lvs | Least Variant Set selection and Normalization Function(s)
plot-method | Plot of Residual Variance and Array Effect
preproc-method | Methods for Function preproc
preproc-methods | Methods for Function preproc
preproc<--method | Methods for Function preproc
preproc<--methods | Methods for Function preproc
probeNames-method | Methods for Function probeNames
probeNames-methods | Methods for Function probeNames
read.mir | Read in miRNA Data from Agilent Feature Extractiion Output Files
RLM | Robust Fitting of Linear Models
rlmFit | Fitter Functions for Robust Linear Models
sampleNames-method | Methods for Function sampleNames
sampleNames-methods | Methods for Function sampleNames
summarize | LVSmiRNA Summarization Function(s) for microRNA Microarray
summarize.EList | LVSmiRNA Summarization Function(s) for microRNA Microarray
summarize.RGList | LVSmiRNA Summarization Function(s) for microRNA Microarray