estNormalizationFactors {NanoStringDiff} | R Documentation

## estimate normalization factors,include positive size factors, background noise, housekeeping size factors.

### Description

This function estimates positive size factors, background noise and housekeeping size factors for the input "NanoStringSet" object and return the same object with positiveFactor, negativeFactor and housekeepingFactor slots filled or replaced.

### Usage

       estNormalizationFactors(NanoStringData)

### Arguments

`NanoStringData` | An object of "NanoStringSet" class.

### Value

The same "NanoStringSet" object with positiveFactor, negativeFactor and housekeepingFactor field filled or replaced.

### Author(s)

hong wang <hong.wang@uky.edu> chi wang <chi.wang@uky.edu>

### Examples

    data(NanoStringData)
    NanoStringData=estNormalizationFactors(NanoStringData)
    pf=positiveFactor(NanoStringData)
    nf=negativeFactor(NanoStringData)
    hf=housekeepingFactor(NanoStringData)

[Package NanoStringDiff version 1.9.2 Index]