84e60024b80dbe4fdd18cf20efd1a6a3 *CITATION
e16da5ed5cd95f8bd633ae2e2d5f38ce *DESCRIPTION
42d42be6e99e9f67bc56cd6d355cf4c9 *INDEX
f55de8072998fa61f61d20342fdacfe0 *Meta/Rd.rds
7f532e677b399de99b8ca9453103405a *Meta/features.rds
1a3c2a2e634ee8ba1f544bc1e045e6b7 *Meta/hsearch.rds
20396b6d6b4508f8a0ae0c69a3bad5f1 *Meta/links.rds
b5e9f2a990cb50fab2296b0bcf9077f1 *Meta/nsInfo.rds
4cfb0304c480417df8f800c9e1ca6bcf *Meta/package.rds
277b02e739c5993a575691c296111e15 *Meta/vignette.rds
30ca56490fce18ceb59bc564f7150498 *NAMESPACE
b26aa6272ce16cb4b52b9e7b5fadbdf2 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/PGA
e3254bccf5411bf39a4106ff32df138e *R/PGA.rdb
7b664eb6b9e8dbe83fc7832cd2afc318 *R/PGA.rdx
da744d2fd1ce9ea8082ead76055bd1ee *doc/PGA.R
8fe205eac3dc953585f2beca1bc4a2d2 *doc/PGA.Rnw
b2206cf599e3ff0c692a3f343ae6867e *doc/PGA.pdf
16e7a0c32c71426f0506a334612eb607 *doc/index.html
d2d3001867978814dbb4f00d42de4619 *extdata/annotation/exon_anno.RData
9dada94eeb9674f03ed9b635c52cba72 *extdata/annotation/ids.RData
db7bedb40cc3d176b8adcb26cd2b7dc4 *extdata/annotation/procodingseq.RData
d1736ea15c31f160d149ed72a3e0baed *extdata/annotation/proseq.RData
b628aedf208c94ce986553216beb0e64 *extdata/annotation/splicemax.RData
90e65f32186a16153d5eec36bec09147 *extdata/annotation/txdb.sqlite
3aafce959a5cf5cdf207215ec236bbe2 *extdata/input/PGA.vcf
51fc19ac042cc844740c53b8d9cdf5ec *extdata/input/Trinity.fasta
671180bb64135edd17d9aa1e9e943063 *extdata/input/junctions.bed
9dff2ad9f7ff0e0eb8e05242ad5d8950 *extdata/input/mascot.dat
a9121d2732844083edb4558ab53cfb1d *extdata/input/msgfplus.mzid
1268f9781323037abfb7413176f8d76d *extdata/input/pga.mgf
8552639adf7bd23addfbb4dab285c0cd *extdata/input/transcripts.gtf
33a35a40884fa542ed1ece55ef46e372 *help/AnIndex
84e2e2bbf47c65ae4c625fab8e4c4580 *help/PGA.rdb
e328d99e8b6d4fae261eb90983d8b705 *help/PGA.rdx
ea4901f26c21d549087bc30ab0a79d4c *help/aliases.rds
d8f87578dba8f29d3a05d7a968831a73 *help/paths.rds
ae4c170df491cc304a5cfbc6bc3ac8dc *html/00Index.html
6a3b1dcfdad2b4c2750e4d6a6220e3d5 *html/PrepareAnnotationEnsembl2.html
63346a60a16c344e7d6b537e536425fd *html/PrepareAnnotationRefseq2.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
7e84e0acc00dcb3541553024dfd8f540 *html/addGeneName4Ensembl.html
ab4a528facc207536fd6802444b85f16 *html/createProDB4DenovoRNASeq.html
79e31a8c50a725dca3c484b7e4150c4a *html/dbCreator.html
4cb959df74fcb736c9d202e472483cf3 *html/easyRun.html
49d5b4162f7e5970d1d826d006e9ff71 *html/parserGear.html
6557596885a265c982e86853ed8ad8eb *html/reportGear.html
2ae72503b978a4a5a3c2d89455ef8f3e *html/runTandem.html
912baa3efd6bd570df218f6072007c34 *parser4PGA.jar
720b2a86b21fa0eacbaf1abdbdf455ec *unitTests/test_check_parser.R
