4cc5d9f7d623e319afcb3f2287880a8e *AlignerIndexPkg-template/DESCRIPTION
d41d8cd98f00b204e9800998ecf8427e *AlignerIndexPkg-template/NAMESPACE
552559b3564ab3d8b8fa307243177ee4 *AlignerIndexPkg-template/inst/dummy.txt
54822f8844b75973286c3c80a513a85b *AlignerIndexPkg-template/man/package.Rd
fdea437131f08c295b914b86a5edb542 *CITATION
ca2932f3185ece998da02bde54a1b5f4 *DESCRIPTION
5fe555651bda18381df084b80e0cdc7e *INDEX
711ec6f85755903a0e9651374c9456e9 *Meta/Rd.rds
a46f1debdc1f45796be2b2a0e6b3b378 *Meta/features.rds
a6baf9f1082b6e76a71e87ae98c921ee *Meta/hsearch.rds
cfc31000224b8724babcad0fd83900a7 *Meta/links.rds
fd82c26e18ab6e2f5cf5525a47858742 *Meta/nsInfo.rds
8ede6315d76aadba6233d24eed7ee0be *Meta/package.rds
533d4bd5d5d8f628d01226dca7cfff41 *Meta/vignette.rds
da642ca4c0353502f00d4ae647f21873 *NAMESPACE
55ef883893bb0acab0338dd99bba3ba5 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/QuasR
fb6b4225063ac36597896aa71b46b96b *R/QuasR.rdb
dceadce58f69cc6ec7f2ad20112e8ea4 *R/QuasR.rdx
536265661564781003acbe43e8b870d9 *doc/QuasR.R
8044bc5008077be7c5bb358aa5df33c7 *doc/QuasR.Rnw
38e6200176f0dc58ec9065feb9fe5757 *doc/QuasR.pdf
c40fb11c3990ff9e9e5926cd260417a4 *doc/index.html
351e5e3e83799cea5cd439ccbb2ba161 *extdata/NC_001422.1.fa
5d16aef00974765130f439f463d7b01b *extdata/auxiliaries.txt
0f28c6db3f88d348506fe9bb9c3b8e7f *extdata/bis_1_1.fa.bz2
8f2bfd93bf5ff6d961b0be40ee3c1b83 *extdata/chip_1_1.fq.bz2
f1d51570320f43892709fae2c7a28485 *extdata/chip_2_1.fq.bz2
6cf516257ac32f9f881ef384add30864 *extdata/hg19sub.fa
74e8085dc402f573f6869fea3e05d433 *extdata/hg19sub_annotation.gtf
d6dbfb598e3c5d34f637bdd4ff736374 *extdata/hg19sub_snp.txt
b3fc2177fdf05d25f73d060e39fc6e3d *extdata/mirbaseXX_qsr.gff3
7c8c99eb6d9fbab7e4ec80579526fbd0 *extdata/mirna_1.fa
5c5bffc55de06de92ad753f2fcb27649 *extdata/phiX_paired_withSecondary.bam
4d34c56a038b62e5d18516b987827a8f *extdata/phiX_paired_withSecondary.bam.bai
0e71bb84d00cf8f7e887a526d966f9a9 *extdata/phiX_paired_withSecondary_sampleFile.txt
3ed26803aa2f2ced2a52121fd2b75720 *extdata/rna_1_1.fq.bz2
1c25db294e8aa1fa89e5e21594e716d9 *extdata/rna_1_2.fq.bz2
5a61a358d82192eb2c59fae8a500bed3 *extdata/rna_2_1.fq.bz2
c673358cfc1e15b739a3515ee3213ab9 *extdata/rna_2_2.fq.bz2
908f9b45d20258007d0f81d65b419a92 *extdata/samples_bis_single.txt
9c8200c012b2330041c6bdec5e36b03c *extdata/samples_chip_single.txt
91fc43642ee0a321b1343785236d8e21 *extdata/samples_mirna.txt
4fa5d649b3d22195ae12437886fcb261 *extdata/samples_rna_paired.txt
c91ae49b0f37a830d52e71c5d3de8dca *extdata/samples_rna_single.txt
d33320db1c6340c8a5f0d566281f5c03 *help/AnIndex
11d182fa8c58a92e08cc8841b6f257b7 *help/QuasR.rdb
6268b6d5d426399cc5895e241afa3452 *help/QuasR.rdx
2c3ce5987e10baea853c6b49fb9bd696 *help/aliases.rds
47b66c9fd271f89dd1edb2398a7860f7 *help/paths.rds
16a903a8d88311dfa4e17abe958c583c *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
346f537f02431caa40b819f87f295f39 *libs/x64/QuasR.dll
3020a9f2ca081a5046f6a248b8478d08 *unitTests/help_function.R
6eda48dc5e4c9d1a66abec91c4f7b493 *unitTests/test_preprocessReads.R
bf3c7794bfd0a0a2622b5aaec33146e6 *unitTests/test_qAlign.R
85f7bea427614b52facf24876bc42bc3 *unitTests/test_qCount.R
6c790561faeabc8d018df6d9f43f5b23 *unitTests/test_qExportWig.R
174ce20e29832252b8664ee30213b8cc *unitTests/test_qMeth.R
4e265e32ee7c9ec3e4d3e398d735a93f *unitTests/test_qProfile.R
5b75c8af2ba27976cd1a3d7c518bd47d *unitTests/test_qProject.R
c2cb6e0c01c0e025862c9ea652d12690 *unitTests/test_utilities.R
