getTxdbFeatures {RCAS} | R Documentation

## getTxdbFeatures

### Description

This function takes as input a txdb object from GenomicFeatures library. Then extracts the coordinates of gene features such as promoters, introns, exons, 5'/3' UTRs, and whole transcripts.

### Usage

    getTxdbFeatures(txdb)

### Arguments

`txdb` | A txdb object imported by GenomicFeatures::makeTxDb family of functions

### Value

A list of GRanges objects

### Examples

    data(gff)
    txdb <- GenomicFeatures::makeTxDbFromGRanges(gff)
    txdbFeatures <- getTxdbFeatures(txdb)

[Package RCAS version 1.4.4 Index]