d899626bfdd384dd91c8b8199e8faa4f *CITATION
c1f67898a65265e27fdbcc2f2133e72d *DESCRIPTION
e8590c21ca5e59f97ba8a4f64e4ddec0 *INDEX
873e2252d29b83fe71b910554b7c1525 *Meta/Rd.rds
8bbde2c9bacc6df0374d3a4d81fd38d8 *Meta/data.rds
317735fd3091c51c4b67896cd2ea82be *Meta/features.rds
9b927d6b44d704451089868bc048f5bf *Meta/hsearch.rds
8923888db65425ad2108bca36251c776 *Meta/links.rds
b1a7a89ddb1d53e2e3f5a09e90fbfe5a *Meta/nsInfo.rds
248685618275de92e1a597873b257f33 *Meta/package.rds
340062b6e8c8ffe2d17b6e8a8964bd07 *Meta/vignette.rds
49ac124b0d4a80bf7dc47b79715e3f68 *NAMESPACE
c37a4f5f2a74fcbf3abf08197ae6ad4b *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/RCAS
89178b8365e8e6bcc0a7e18fa3871642 *R/RCAS.rdb
4d17f178966fce67bd751d286623aeb8 *R/RCAS.rdx
fb7b79b58eb486d6f1186b6248de68d1 *data/Rdata.rdb
b87e15f675c1b4912e70c8cdc5dd78be *data/Rdata.rds
53e1e6062c573a6e3c04cbf95952b573 *data/Rdata.rdx
2c0fc3deefcbcf2a786efa6d7b56e189 *data/datalist
2077b16a28c9acba8e80be8fb64ee38e *doc/RCAS.metaAnalysis.vignette.R
fe54a2d6bc82f877aea6d5309fd7b999 *doc/RCAS.metaAnalysis.vignette.Rmd
5712ac43d5a1cd3f6c46698033df43bb *doc/RCAS.metaAnalysis.vignette.html
03d0870863a622109453f2f188ef60b2 *doc/RCAS.vignette.R
eae14c71cd3106b4a2c54d86bee3ead6 *doc/RCAS.vignette.Rmd
f5b1d8263a56d522a291492d922b1fca *doc/RCAS.vignette.html
247e560902e4d56eb3cc2fe9bec32180 *doc/index.html
4f8573e5f8b697319117c88327a4a236 *extdata/EIF4A3Sauliere20121a.bed
2779ca3ab60fcb8e560e86978c5aa1d2 *extdata/EIF4A3Sauliere20121b.bed
32aa8a32aa4b0b1b69dd340437d6e924 *extdata/FMR1_Ascano2012a_hg19.bed
d4d7442832f9b1d40ed3bb589326839a *extdata/FMR1_Ascano2012b_hg19.bed
5ae985d0d00b8dbc5c4e51481d2799b4 *extdata/FUS_Nakaya2013c_hg19.bed
53ec61cdf36a09a61f64ca31fdf0a0ae *extdata/FUS_Nakaya2013d_hg19.bed
2af4c54bf647b7e46dec40972101443e *extdata/hg19.RCASDB.sqlite
f0de64b19c59a7b202c8faff4d599ace *extdata/hg19.sample.gtf
99fb8d5b4e2fc1a11b4e92d5bd994d05 *extdata/hg19.sample.gtf.granges.rds
aa87ec9a0e15f7849d72747634b911ce *extdata/msigdb_test.gmt
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile.bed
8cea927d9a40a56fbdb778eae43f81e5 *extdata/testfile2.bed
5c2561dda8172f73b4b71fc28d36768c *help/AnIndex
c05afd8805f54a489c5f78f9afb0c433 *help/RCAS.rdb
e57385a41f0600330507bacb37c89a7e *help/RCAS.rdx
a2d844e2bf1b56875092f93c58b19484 *help/aliases.rds
48b327be5c72365142a8dee0395bfb31 *help/paths.rds
d67e728a7b7e500d9f3aa8ae621d7818 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
cd489af45793612004e0e413d36d0bfa *html/calculateCoverageProfile.html
bbd11dbfe7bb5020076f8137eef6c468 *html/calculateCoverageProfileFromTxdb.html
bc2da4dc687d543a62d5ba0906e263b7 *html/calculateCoverageProfileList.html
44203ae3a5a58062aff5db2c13ba0cef *html/calculateCoverageProfileListFromTxdb.html
e5c5459a47e3636752a99029fd5f091d *html/createControlRegions.html
07ccaf6589468adf0f710cf8d4aae124 *html/createDB.html
45c1f808256a97ef40b1039241439564 *html/createOrthologousGeneSetList.html
35da2d0aaeb4a5588ac7e3d2ae241569 *html/deleteSampleDataFromDB.html
07338bb65d9fb7dce0b98eb050a1540f *html/discoverFeatureSpecificMotifs.html
5c7fe90dae4f22a451ef4787f832aa49 *html/extractSequences.html
4d0614e0188868864810f77d40eb6156 *html/geneSets.html
0e88799050b36a445b064b5b7663047a *html/getFeatureBoundaryCoverage.html
2fb11f2f8c5e137c1fbd905cb4a7c447 *html/getFeatureBoundaryCoverageBin.html
d25e39d328811df47b2840737f43fd44 *html/getFeatureBoundaryCoverageMulti.html
161a21c6932085a7e82aa312f73c3954 *html/getIntervalOverlapMatrix.html
688bf937a8a5728d51bdd66c8f3d3d24 *html/getMotifSummaryTable.html
f48f3351bd494e6f4e3312efd7270904 *html/getTargetedGenesTable.html
d1361628d06a6b89bd4eb88b19862235 *html/getTxdbFeatures.html
99f92cac16b9aaef8bcc3b229bc7d12c *html/getTxdbFeaturesFromGRanges.html
ace1a9f5a2ea07bc065c2c46224c495a *html/gff.html
bca28be06fa785ed17699b5b2d969e04 *html/importBed.html
774b1383ccd134d88c51f544b68ff671 *html/importBedFiles.html
ddb496b3115b2666b58b6b303c18338d *html/importGtf.html
20d3640a9995e5a2639f17d089a15c34 *html/parseMsigdb.html
f9504cfe01b7adad9dfa4f79f7a4bf31 *html/plotFeatureBoundaryCoverage.html
9ab02786a3240a76c1d0935dcd5a985b *html/printMsigdbDataset.html
7b8cf1453ba0e9eca2bd8d7b81ccb4e5 *html/queryGff.html
aef4bc5074a6e871476a7411a232c2a2 *html/queryRegions.html
daef341b497d4bdd5a5a7686422883d6 *html/retrieveOrthologs.html
ac30531d1f408b021872c40789dcdf9d *html/runGSEA.html
7594b04c286cb5a559b8140b96951693 *html/runMotifRG.html
d237c8cebb6969217d16a1cdee9eaa18 *html/runReport.html
54589f7265f3d0da79e2285603c213af *html/runReportMetaAnalysis.html
51c9420f4c4aae5ebd1dcebeb3aa53f4 *html/runTopGO.html
362eeabfe5eca2d64209c7bd4c6764ae *html/summarizeDatabaseContent.html
213b7201b1d208b53c508b2bbae3331d *html/summarizeQueryRegions.html
789f06381ceba7cda1afe022a04bd143 *html/summarizeQueryRegionsMulti.html
053cf68e09070e277a798b0736fb7874 *reporting_scripts/footer.html
b1442cb874099cb5af45301431024ee0 *reporting_scripts/header.html
1a4cc512e68285211bdc5bb351eb74ab *reporting_scripts/report.Rmd
e6ab695c29d907c81228c883e5af619c *reporting_scripts/reportMetaAnalysis.Rmd
