c3bde156c0761d9578badd79a0161031 *CITATION
1f1a60ab88048cacca3b81dc2ee8e113 *DESCRIPTION
79c58e2ad89d35e1a68916a9d5ba0b79 *INDEX
d4112ab2b054c99506dfedd12d78e18f *Meta/Rd.rds
5c31cd09055355f32c652613a45ba724 *Meta/data.rds
a46f1debdc1f45796be2b2a0e6b3b378 *Meta/features.rds
27867075c1ea32df943e213b74d35986 *Meta/hsearch.rds
c2e6c23515c5859fdd5845ea1804acd0 *Meta/links.rds
b9581674d665118a66bb98f5857c2c28 *Meta/nsInfo.rds
55c939f2a139120f66b0c9e765d5beb3 *Meta/package.rds
11b56cb10252574dfe3cfe110dae9ab8 *Meta/vignette.rds
38841826b018c010f709715dabf2979a *NAMESPACE
a0fddb94813c5ed2c6f607d24b436efd *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/SGSeq
a5b313a409d4d9bcf19720ca1dee1ae6 *R/SGSeq.rdb
1b08cdb9ebf4f7334de50a911866c5b5 *R/SGSeq.rdx
7b3f3cf7597ee8eb50f9c1360decfd8f *data/Rdata.rdb
a3e4540410f55635a73259f2ba09088f *data/Rdata.rds
5f5f6a3956f617ea9273044c04b69a4e *data/Rdata.rdx
2ab20d812cb9c438c10569f568830474 *doc/SGSeq.R
1570d44a3a779dc9624e1aabf2d61fb4 *doc/SGSeq.Rmd
de4ff8872d304b255c5143961337a0a5 *doc/SGSeq.html
26a827488ea280a0a53b9fdc2455f4e6 *doc/index.html
f635a290f6dd7bd6a571a748b9b4ce2d *extdata/bams/N1.bam
10e437ecd83a1648f6feb28efd666a3d *extdata/bams/N1.bam.bai
6ae387d023817532da8ab3273731c6b7 *extdata/bams/N2.bam
7bc7623be9eb5b52f7d272b1e54d7c1f *extdata/bams/N2.bam.bai
e07e5bf79859b2028cb402c079577316 *extdata/bams/N3.bam
20cd985ef7ffa218da184f187ce50dea *extdata/bams/N3.bam.bai
b0a8a2796e4cd67d1c5231481dc298f7 *extdata/bams/N4.bam
c14641aca82d7b303f9ab448ce5b4f2e *extdata/bams/N4.bam.bai
dab9dc6d74c1e618b960baa0148740af *extdata/bams/T1.bam
f1bd4bdf90f83ca520ab1fba63cea726 *extdata/bams/T1.bam.bai
6e43c101708a4040937e389b9888832b *extdata/bams/T2.bam
b48cfbe384de76d521dff37845bb811b *extdata/bams/T2.bam.bai
1751240dde82ab77847b18cc93ce4b31 *extdata/bams/T3.bam
b0c6a086071d7f7d5c5153cfc1778147 *extdata/bams/T3.bam.bai
0ed841f711101c6ed48133d5cf35c9df *extdata/bams/T4.bam
33e452914d0a92a7287b5902f7a223d3 *extdata/bams/T4.bam.bai
7d31b555fc3a0ef493db24637a69d7b5 *help/AnIndex
02d6b8a60a4dbb4ee0d9aa5d619518c3 *help/SGSeq.rdb
3b6412b15b352d3e89f64562efeedbd4 *help/SGSeq.rdx
5a31836d26eafe88886483d0abc88e6a *help/aliases.rds
e35e8f895fe992495b0153c7c8edd463 *help/paths.rds
d88b374b8a6cef1b95f1fb6dc75ff383 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
916134d923047d0d83dd3cac336afac2 *scripts/createExampleData.R
62e6eb32b9d91e2d2e22f8a0ebe3999b *unitTests/test_analyzeFeatures.R
41062843ebebbec77ddf6fbc1eebe14b *unitTests/test_analyzeVariants.R
2460db8d6220b2478ea7e1b0ab17b91d *unitTests/test_annotate.R
445456f7b917f405ff4ffa9c6f0c305a *unitTests/test_classes.R
d54b8dbf8b7820c8df933c3e5c5d1fde *unitTests/test_convertToSGFeatures.R
008fcf1ee84836bd7c707d4e91053124 *unitTests/test_convertToTxFeatures.R
99a48da91dfb8fc378c35fb358cbc1b5 *unitTests/test_findSGVariants.R
018d012a9bc57431328f9574ad429925 *unitTests/test_getBamInfo.R
49e19e07becae41efb382ed9f01719b2 *unitTests/test_getSGFeatureCounts.R
66d59bb78d566b15751680e3d3fa1c1d *unitTests/test_getSGVariantCounts.R
d299302c3d63985fa8ef599c0f2f1768 *unitTests/test_mergeTxFeatures.R
9fb64b11e500eed1dfe3cd4602f1e529 *unitTests/test_predictTxFeatures.R
75201f127c6a3884632ed88c88714ee0 *unitTests/test_predictVariantEffects.R
