Edges_Diseases_obj                                          get Edges dataframe for Gene/Disease association from geNetClassifier
Mutation_obj                                                Atribute mutation frequency to nodes
Node_Diseases_obj                                           Attributes color and shape to Nodes of Diseases
Node_df_FreqIn                                              Attributes size to Nodes depending on number of interaction
Node_obj_CNA_ProfData                                       Attribute CNA data to node border
Node_obj_FreqIn                                             Attribute interaction frequency to node size
Node_obj_Met_ProfData                                       Attribute gene Methylation to Nodes
Node_obj_mRNA_Classifier                                    Atrribute genes expression to color nodes
Studies_obj                                                 get object for grViz. Link Studies to genes
UnifyRowNames                                               Unify row names in data frame with the same order of gene list.
attriColorGene                                              Attribute Color to Gene
attriColorValue                                             Attribute Color to Value
attriColorVector                                            Attribute color to a vector of numeric values
attriShape2Gene                                             Attribute shape to nodes
attriShape2Node                                             Attributes shape to Nodes
bioCancer                                                   Launch bioCancer with default browser
checkDimensions                                             Chech wich Cases and genetic profiles are available for every seleted study
coffeewheel                                                 This is an htmlwidgets-based visualization tool for hierarchical data. It is zoomable, meaning that you can interact
                                                            with the hierarchy and zoom in/out accordingly.
coffeewheelOutput                                           Widget output function for use in Shiny
displayTable                                                Display dataframe in table using DT package
epiGenomics                                                 Default dataset of bioCancer
getFreqMutData                                              get mutation frequency
getGenesClassification                                      get genes classification
getListProfData                                             get list of data frame with profiles data (CNA,mRNA, Methylation, Mutation...)
getList_Cases                                               get list of cases of each selected study in Classifier panel
getList_GenProfs                                            get list of genetic profiles of each selected study in Classifier panel
getMegaProfData                                             search and get genetic profiles (CNA,mRNA, Methylation, Mutation...) of gene list upper than 500
getSequensed_SampleSize                                     get samples size of sequensed genes
grepRef                                                     search and get genetic profiles (CNA,mRNA, Methylation, Mutation...)
reStrColorGene                                              Restructure the list of color attributed to the genes in every dimenssion for every studies
reStrDimension                                              Restructure the list of color attributed to the genes in every study for every dimensions
reStrDisease                                                Restructure the list of color attributed to the genes in every disease
renderCoffeewheel                                           Widget render function for use in Shiny
returnTextAreaInput                                         Return message when the filter formula is not correct (mRNA > 500)
switchButton                                                A function to change the Original checkbox of rshiny into a nice true/false or on/off switch button No javascript
                                                            involved. Only CSS code.
user_CNA                                                    Example of Copy Number Alteration (CNA) dataset
user_MetHM27                                                Example of Methylation HM27 dataset
user_MetHM450                                               Example of Methylation HM450 dataset
user_Mut                                                    Example of Mutation dataset
user_mRNA                                                   Example of mRNA expression dataset
whichGeneList                                               Verify which gene list is selected
