importInfusion {chimeraviz} | R Documentation

## Import results from an InFusion run into a list of Fusion objects.

### Description

A function that imports the results from an InFusion run nto a list of Fusion objects.

### Usage

    importInfusion(filename, genomeVersion, limit)

### Arguments

`filename` | Filename for the jaffa_results.csv file.
`genomeVersion` | Which genome was used in mapping (hg19, hg38, etc.).
`limit` | A limit on how many lines to read.

### Value

A list of Fusion objects.

### Examples

    infusionData <- system.file(
      "extdata",
      "infusion_fusions.txt",
      package = "chimeraviz")
    fusions <- importInfusion(infusionData, "hg19", 3)
    # This should import a list of 3 fusions described in Fusion objects.

[Package chimeraviz version 1.4.3 Index]