coseq-package	coseq-package
clusterEntropy	clusterEntropy
clusterInertia	clusterInertia
clusters	coseqHelpers
clusters,coseqResults-method	coseqHelpers
clusters,data.frame-method	coseqHelpers
clusters,matrix-method	coseqHelpers
clusters,RangedSummarizedExperiment-method	coseqHelpers
compareARI	compareARI
compareARI,coseqResults-method	compareARI
compareARI,data.frame-method	compareARI
compareARI,matrix-method	compareARI
compareARI,RangedSummarizedExperiment-method	compareARI
compareARI-methods	compareARI
compareICL	compareICL
convertLegacyCoseq	convertLegacyCoseq
coseq	coseq
coseq,data.frame-method	coseq
coseq,DESeqDataSet-method	coseq
coseq,matrix-method	coseq
coseq-methods	coseq
coseqFullResults	coseqHelpers
coseqFullResults,coseqResults-method	coseqHelpers
coseqGlobalPlots	plot
coseqModelPlots	plot
coseqResults	coseqResults
coseqResults-class	coseqResults
coseqRun	coseqRun
DDSEextract	coseqHelpers
DDSEextract,Capushe-method	coseqHelpers
Djumpextract	coseqHelpers
Djumpextract,Capushe-method	coseqHelpers
fietz	fietz
ICL	coseqHelpers
ICL,coseqResults-method	coseqHelpers
ICL,MixmodCluster-method	coseqHelpers
ICL,mixmodCluster-method	coseqHelpers
ICL,NULL-method	coseqHelpers
ICL,RangedSummarizedExperiment-method	coseqHelpers
kmeansProbaPost	kmeansProbaPost
likelihood	coseqHelpers
likelihood,coseqResults-method	coseqHelpers
likelihood,MixmodCluster-method	coseqHelpers
likelihood,NULL-method	coseqHelpers
likelihood,RangedSummarizedExperiment-method	coseqHelpers
logclr	logclr
matchContTable	matchContTable
model	coseqHelpers
model,coseqResults-method	coseqHelpers
nbCluster	coseqHelpers
nbCluster,coseqResults-method	coseqHelpers
nbCluster,MixmodCluster-method	coseqHelpers
nbCluster,NULL-method	coseqHelpers
nbCluster,RangedSummarizedExperiment-method	coseqHelpers
NormMixClus	NormMixClus
NormMixClusK	NormMixClusK
NormMixParam	NormMixParam
plot	plot
plot,coseqResults,ANY-method	plot
plot,coseqResults-method	plot
plot-methods	plot
proba	coseqHelpers
proba,MixmodCluster-method	coseqHelpers
profiles	coseqHelpers
profiles,coseqResults-method	coseqHelpers
show	coseqHelpers
show,coseqResults-method	coseqHelpers
summary	summary
summary,coseqResults-method	summary
summary-methods	summary
tcounts	coseqHelpers
tcounts,coseqResults-method	coseqHelpers
transformationType	coseqHelpers
transformationType,coseqResults-method	coseqHelpers
transformRNAseq	transformRNAseq
