runHeatmap {debrowser} | R Documentation

## runHeatmap

### Description

Creates a heatmap based on the user selected parameters within shiny.

### Usage

    runHeatmap(data, title = "Title", dend = "both", names = FALSE,
      clustering_method = c("ward.D2", "complete", "single", "average",
      "mcquitty", "median", "centroid"), distance_method = c("euclidean", "cor",
      "maximum", "manhattan", "canberra", "binary", "minkowski"),
      interactive = FALSE)

### Arguments

`data,` | a matrixthat includes expression values
`title,` | title of the heatmap
`dend,` | dendogram
`names,` | a flag to show the rownames
`clustering_method` | = c('complete', 'ward.D2', 'single', 'average', 'mcquitty', 'median' , 'centroid')
`distance_method` | = c('cor','euclidean', 'maximum', 'manhattan', 'canberra', 'binary' ,'minkowski')
`interactive,` | interactive heatmap

### Value

heatmap.2 plot

### Examples

        x <- runHeatmap(mtcars)

[Package debrowser version 1.6.8 Index]