erccROC {erccdashboard} | R Documentation

## Produce Receiver Operator Characteristic (ROC) Curves and AUC statistics

### Description

Produce Receiver Operator Characteristic (ROC) Curves and AUC statistics

### Usage

    erccROC(exDat)

### Arguments

`exDat` | list, contains input data and stores analysis results

### Examples

    data(SEQC.Example)

    exDat <- initDat(datType="array", isNorm=FALSE,
                     exTable=UHRR.HBRR.arrayDat,
                     filenameRoot="testRun", sample1Name="UHRR",
                     sample2Name="HBRR", erccmix="RatioPair",
                     erccdilution = 1, spikeVol = 50,
                     totalRNAmass = 2.5*10^(3), choseFDR=0.01)

    exDat <- est_r_m(exDat)

    exDat <- dynRangePlot(exDat)

    exDat <- geneExprTest(exDat)

    exDat <- erccROC(exDat)

    exDat$Figures$rocPlot

[Package erccdashboard version 1.12.1 Index]