ScoreMatrix-class {genomation} | R Documentation

## An S4 class for storing `ScoreMatrix` function results

### Description

The resulting object is an extension of a `matrix` object, and stores values (typically genome-wide scores) for a predefined set of regions Each row on the ScoreMatrix is a predefined region (Ex: CpG islands, promoters) and columns are values across those regions.

### Constructors

see `ScoreMatrix`

### Coercion

as(from, "matrix"): Creates a matrix from `ScoreMatrix` object. You can also use S3Part() function to extract the matrix from `ScoreMatrix` object.

### Subsetting

In the code snippets below, x is a ScoreMatrix object. `'x[i,j]'`: Get or set elements from row `i` and column `j` and return a subset ScoreMatrix object.

### See Also

`ScoreMatrix`

[Package genomation version 1.11.3 Index]