Package: gespeR
Imports: Matrix, glmnet, cellHTS2, Biobase, biomaRt, doParallel,
        parallel, foreach, reshape2, dplyr
Depends: methods, graphics, ggplot2, R(>= 2.10)
Suggests: knitr
biocViews: CellBasedAssays, Preprocessing, GeneTarget, Regression,
        Visualization
VignetteBuilder: knitr
Type: Package
Lazyload: yes
Title: Gene-Specific Phenotype EstimatoR
Version: 1.10.1
Date: 2015-07-22
Author: Fabian Schmich
Maintainer: Fabian Schmich <fabian.schmich@bsse.ethz.ch>
Description: Estimates gene-specific phenotypes from off-target confounded RNAi
    screens. The phenotype of each siRNA is modeled based on on-targeted and
    off-targeted genes, using a regularized linear regression model.
License: GPL-3
URL: http://www.cbg.ethz.ch/software/gespeR
Collate: 'Phenotypes-class.R' 'TargetRelations-class.R'
        'gespeR-class.R' 'gespeR-concordance.R' 'gespeR-functions.R'
        'gespeR-generics.R' 'gespeR-methods.R' 'gespeR-package.R'
NeedsCompilation: no
Packaged: 2018-04-05 00:40:44 UTC; biocbuild
Built: R 3.4.4; ; 2018-04-05 04:26:15 UTC; windows
