# High Throughput Sequencing Cell Authentication Toolkit

## Documentation for package ‘seqCAT’ version 1.0.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

seqCAT-package | seqCAT: High Throughput Sequencing Cell Authentication Toolkit
calculate_similarity | SNV profile similarity calculations
compare_many | Comparisons of many SNV profiles
compare_profiles | Binary SNV profile comparisons
create_profile | SNV profile creation
filter_variants | Variant filtering
list_cosmic | Read COSMIC SNV data
plot_heatmap | Plot similarity heatmap
plot_impacts | Plot SNV impact distribution
read_cosmic | Read COSMIC SNV data
read_profile | Read SNV profile
seqCAT | seqCAT: High Throughput Sequencing Cell Authentication Toolkit
test_comparison | Overlapping and compared SNVs
test_profile_1 | SNV profile 1
test_profile_2 | SNV profile 2
test_similarities | Collated similarities object