groupClade {treeio} | R Documentation

## groupClade method

### Description

group selected clade

### Usage

    groupClade(object, node, group_name = "group", ...)

    ## S4 method for signature 'beast'
    groupClade(object, node, group_name = "group")

    ## S4 method for signature 'codeml'
    groupClade(object, node, group_name = "group")

    ## S4 method for signature 'jplace'
    groupClade(object, node, group_name = "group")

    ## S4 method for signature 'treedata'
    groupClade(object, node, group_name = "group")

    ## S4 method for signature 'phylip'
    groupClade(object, node, group_name = "group")

    ## S4 method for signature 'phylo'
    groupClade(object, node, group_name = "group")

    ## S4 method for signature 'phangorn'
    groupClade(object, node, group_name = "group")

### Arguments

`object` | supported objects, including phylo, paml_rst, codeml_mlc, codeml, jplace, beast, hyphy
`node` | a internal node or a vector of internal nodes
`group_name` | name of the group, 'group' by default
`...` | additional parameter

### Value

group index

[Package treeio version 1.2.2 Index]