write.jplace {treeio} | R Documentation

## write.jplace

### Description

generate jplace file

### Usage

    write.jplace(nwk, data, outfile)

### Arguments

`nwk` | tree in newick format
`data` | annotation data
`outfile` | jplace output file

### Value

jplace file

### Author(s)

ygc

### Examples

    tree <- system.file("extdata", "pa.nwk", package="treeio")
    data <- read.csv(system.file("extdata", "pa_subs.csv", package="treeio"),
                    stringsAsFactor=FALSE)
    outfile <- tempfile()
    write.jplace(tree, data, outfile)

[Package treeio version 1.2.2 Index]