Package: ArrayExpressHTS
Title: ArrayExpress High Throughput Sequencing Processing Pipeline
Version: 1.28.0
Author: Angela Goncalves, Andrew Tikhonov
Maintainer: Angela Goncalves <filimon@ebi.ac.uk>, Andrew Tikhonov
 <andrew@ebi.ac.uk>
Description: RNA-Seq processing pipeline for public ArrayExpress
        experiments or local datasets
Depends: sampling, Rsamtools (>= 1.19.36), snow
Imports: Biobase, BiocGenerics, Biostrings, DESeq, GenomicRanges,
        Hmisc, IRanges, R2HTML, RColorBrewer, Rsamtools, ShortRead,
        XML, biomaRt, edgeR, grDevices, graphics, methods, rJava,
        stats, svMisc, utils, sendmailR, bitops
LinkingTo: Rsamtools
License: Artistic License 2.0
biocViews: RNASeq, Sequencing
NeedsCompilation: yes
Packaged: 2017-10-30 23:14:39 UTC; biocbuild
