Package: samExploreR
Type: Package
Title: samExploreR package: high-performance read summarisation to
        count vectors with avaliability of sequencing depth reduction
        simulation
Version: 1.2.0
Depends: ggplot2,Rsubread,RNAseqData.HNRNPC.bam.chr14,edgeR,R (>=
        3.4.0)
Author: Alexey Stupnikov, Shailesh Tripathi and Frank Emmert-Streib
Maintainer: shailesh tripathi <shailesh.tripathy@gmail.com>
Description: This R package is designed for subsampling procedure to
        simulate sequencing experiments with reduced sequencing depth.
        This package can be used to anlayze data generated from all
        major sequencing platforms such as Illumina GA, HiSeq, MiSeq,
        Roche GS-FLX, ABI SOLiD and LifeTech Ion PGM Proton sequencers.
        It supports multiple operating systems incluidng Linux, Mac OS
        X, FreeBSD and Solaris. Was developed with usage of Rsubread.
Imports: grDevices, stats, graphics
License: GPL-3
LazyLoad: yes
Suggests: BiocStyle,RUnit,BiocGenerics,Matrix
biocViews: Sequencing, SequenceMatching, RNASeq, ChIPSeq, DNASeq,
        WholeGenome, GeneTarget, Alignment, GeneExpression,
        GeneticVariability, GeneRegulation, Preprocessing,
        GenomeAnnotation, Software
NeedsCompilation: no
Packaged: 2017-10-31 01:13:34 UTC; biocbuild
