Package: curatedTCGAData
Type: Package
Title: Curated Data From The Cancer Genome Atlas (TCGA) as
        MultiAssayExperiment Objects
Version: 1.0.3
Author: Marcel Ramos <marcel.ramos@roswellpark.org>,
    Levi Waldron <lwaldron.research@gmail.com>,
    Lucas Schiffer <schiffer.lucas@gmail.com>,
    Valerie Obenchain <valerie.obenchain@roswellpark.org>,
    Morgan Martin <martin.morgan@roswellpark.org>
Maintainer: Marcel Ramos <marcel.ramos@roswellpark.org>
Description: This package provides publicly available data from The Cancer
    Genome Atlas (TCGA) Bioconductor MultiAssayExperiment class objects. These
    objects integrate multiple assays (e.g. RNA-seq, copy number, mutation,
    microRNA, protein, and others) with clinical / pathological data. The
    MultiAssayExperiment class links assay barcodes with patient IDs, enabling
    harmonized subsetting of rows (features) and columns (patients / samples)
    across the entire experiment.
License: Artistic-2.0
Depends: R (>= 3.4.0), MultiAssayExperiment
Imports: AnnotationHub, ExperimentHub, S4Vectors, utils
Suggests: BiocStyle, knitr, readr, rmarkdown, testthat
VignetteBuilder: knitr
biocViews: Homo_sapiens_Data, ReproducibleResearch, CancerData
LazyData: true
LazyLoad: yes
RoxygenNote: 6.0.1
NeedsCompilation: no
Packaged: 2017-11-14 14:46:38 UTC; biocbuild
