Package: csawUsersGuide
Version: 1.0.0
Date: 2019-03-13
Title: csaw User's Guide
Authors@R: person("Aaron", "Lun", role=c("aut", "cre"), email =
    "infinite.monkeys.with.keyboards@gmail.com")
Suggests: csaw, chipseqDBData, edgeR,
        TxDb.Mmusculus.UCSC.mm10.knownGene, org.Mm.eg.db, rtracklayer,
        Rsamtools, Gviz, knitr, BiocStyle
biocViews: Workflow, EpigeneticsWorkflow
Description: A user's guide for the csaw package for detecting 
    differentially bound regions in ChIP-seq data. Describes how to
    read in BAM files to obtain a per-window count matrix, filtering 
    to obtain high-abundance windows of interest, normalization 
    of sample-specific biases, testing for differential binding, 
    consolidation of per-window results to obtain per-region statistics,
    and annotation and visualization of the DB results.
License: GPL-3
VignetteBuilder: knitr
Workflow: true
git_url: https://git.bioconductor.org/packages/csawUsersGuide
git_branch: RELEASE_3_9
git_last_commit: 81d83a2
git_last_commit_date: 2019-05-02
Date/Publication: 2019-05-03
NeedsCompilation: no
Packaged: 2019-05-03 16:57:35 UTC; biocbuild
Author: Aaron Lun [aut, cre]
Maintainer: Aaron Lun <infinite.monkeys.with.keyboards@gmail.com>
