| flowcyt.fcs {rfcdmin} | R Documentation |
Flow Cytometry Standard (FCS) files ode{FCS} objects, using the version of 'read.series.FCS' in rflowcyt on October 1, 2005.
The data come from a screening of a compound library. The screening was performed on a cell line. The name of one file corresponds to the position of the sample (cell line aliquot) in a 96 wells plate.
## FCS files to be read with this-is-escaped-code{ or this-is-escaped-codenormal-bracket9bracket-normal function, see examples for details
binary FCS files
British Columbia Cancer Research Center, Vancouver, Canada
Gasparetto, M. textit{et. al.} (2004) Identification of compounds that enhance the anti-lymphoma activity of rituximab usinf flow cytometric high-content screening, textit{Journal of Immunollogical Methods}, textbf{292}, 59-71.
##Example I
if (require(rflowcyt)) {
##obtaining the location of the fcs files in the data
pathFiles<-system.file("bccrc", package="rfcdmin")
drugFiles<-dir(pathFiles)
## reading in the FCS files
drugData<-read.series.FCS(drugFiles,path=pathFiles,MY.DEBUG=FALSE)
}
##Example II
if (require(rflowcyt)) {
## obtaining the location of the fcs files in the data
A06path<- paste(system.file("bccrc", package="rfcdmin"),"A06",sep="/")
## reading in the FCS files
A06<-read.FCS(A06path)
}