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| affxparser-package | Package affxparser |
| 1. Dictionary | 1. Dictionary |
| 2. Cell coordinates and cell indices | 2. Cell coordinates and cell indices |
| affxparser | Package affxparser |
| applyCdfBlocks | Applies a function over the groups in a CDF structure |
| applyCdfGroups | Applies a function over the groups in a CDF structure |
| compareCdfs | Compares the contents of two CDF files |
| convertCdf | Converts a CDF into the same CDF but with another format |
| createCel | Creates an empty CEL file |
| findCdf | Search for CDF files in multiple directories |
| readBpmap | Parses a Bpmap file |
| readBpmapHeader | Parses a Bpmap file |
| readBpmapSeqinfo | Parses a Bpmap file |
| readCdfCellIndices | Reads cell indices of units (probesets) in an Affymetrix CDF file |
| readCdfGroupNames | Reads group names for a set of units (probesets) in an Affymetrix CDF file |
| readCdfHeader | Reads the header associated with an Affymetrix CDF file |
| readCdfUnitNames | Reads unit (probeset) names from an Affymetrix CDF file |
| readCdfUnits | Reads units (probesets) from an Affymetrix CDF file |
| readCel | Reads an Affymetrix CEL file |
| readCelHeader | Parsing the header of an Affymetrix CEL file |
| readCelIntensities | Reads the intensities contained in several Affymetrix CEL files |
| readCelRectangle | Reads a spatial subset of probe-level data from Affymetrix CEL files |
| readCelUnits | Reads probe-level data ordered as units (probesets) from one or several Affymetrix CEL files |
| tpmap2bpmap | Writes BPMAP and TPMAP files. |
| updateCel | Updates a CEL file |
| updateCelUnits | Updates a CEL file unit by unit |
| writeTpmap | Writes BPMAP and TPMAP files. |