| AnnotatedSnpCallSet-class {SNPchip} | R Documentation |
Container for genotype call data accompanied by SNP annotation
Objects can be created by calls of the form new("AnnotatedSnpCallSet", phenoData, experimentData, annotation, calls, callsConfidence, snpLocation, chromosomeAnnotation, chromosome).
chromosomeAnnotation:data.frameassayData:AssayDataphenoData:AnnotatedDataFramefeatureData:AnnotatedDataFrame contains annotation for the SNP's, such as chromosome, physical position, and alleles. experimentData:MIAMEannotation:.__classVersion__:Versions
Class SnpCallSet, directly.
Class eSet, by class SnpCallSet.
Class VersionedBiobase, by class SnpCallSet.
Class Versioned, by class SnpCallSet.
Robert Scharpf