| AnnotatedSnpCopyNumberSet-class {SNPchip} | R Documentation |
Container for copy number data
Objects can be created by calls of the form new("AnnotatedSnpCopyNumberSet", phenoData, experimentData, annotation, copyNumber, cnConfidence, snpLocation, chromosomeAnnotation, chromosome).
chromosomeAnnotation:data.frame assayData:AssayData phenoData:AnnotatedDataFrame experimentData:MIAME featureData:AnnotatedDataFrame. Contains annotation for the SNP's,
such as chromosome, physical position, and alleles. annotation:.__classVersion__:Versions
Class SnpCopyNumberSet, directly.
Class eSet, by class SnpCopyNumberSet.
Class VersionedBiobase, by class SnpCopyNumberSet.
Class Versioned, by class SnpCopyNumberSet.