| intactInteraction-class {Rintact} | R Documentation |
Class "intactInteraction"
Description
A class representing interaction data.
Objects from the Class
Objects are usually created by psi25interaction.
Slots
intact:- character, IntAct ID of the interaction.
interactionType:- character, the method used for detecting
the interaction, such as pull down.
expPubMed:- character, PubMed ID of the publication that
describes the experiment.
expIntAct:- character, IntAct ID of the experiment.
confidenceValue:- character, confidence value of the experimental interaction.
bait:- character, UniProt ID of the bait.
prey:- character, UniProt ID(s) of the prey(s).
inhibitor:- character, UniProt ID of the inhibitor, NA is missing.
neutralComponent:- character, UniProt ID of the neutral components, NA is missing.
Methods
- show
signature(object = "intactInteraction"): a print method
- bait
signature(object = "intactInteraction"): a method to find
all the baits within the intactInteraction class and print them
- prey
signature(object = "intactInteraction"): a method to find
all the prey within the intactInteraction class and print them
Author(s)
Nianhua Li
See Also
psi25interaction
[Package
Rintact version 1.0.0
Index]