| buildGOgraph.topology {topGO} | R Documentation |
This function is building the GO graph starting from the most specific terms. The structure of the GO graph is build recursively.
buildGOgraph.topology(mostSpecificGOs, whichOnto)
mostSpecificGOs |
list of GO terms |
whichOnto |
character string specifying one of the three GO
ontologies: "BP", "MF", "CC" |
An object of class graphNEL-class is returned.
The graph is directed (the edges are from leaves to the root)
and it contains all GO terms specific to whichOnto ontology.
Adrian Alexa
topGOdata-class,
buildLevels,
mapGenes2GOgraph,
annFUN.hgu