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| AverageDuplicates | Merge gene expression data sets |
| check | Merge gene expression data sets |
| check.length | Class mergeCoeff, a class for storing regression coefficients. |
| coeff | Class mergeCoeff, a class for storing regression coefficients. |
| coeff,mergeCoeff-method | Class mergeCoeff, a class for storing regression coefficients. |
| coeff<-,mergeCoeff-method | Class mergeCoeff, a class for storing regression coefficients. |
| exprs,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| exprs<-,mergeExpressionSet,ANY-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| geneNames,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| geneNames<-,mergeExpressionSet,ANY-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| geneStudy | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| geneStudy,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| geneStudy<-,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| hist | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| hist,mergeCor-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| intCor | Correlation of Correlations |
| intCor,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| intcorDens | plot of density functions of integrative correlations |
| intcorDens,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| integrative.cors | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| integrative.cors,mergeCor-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| intersection | ExpressionSet with all common genes in a mergeExpressionSet |
| intersection,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| isna | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| length,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| maxcors | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| maxcors,mergeCor-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| maxintcor | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| mergeCoeff | Class mergeCoeff, a class for storing regression coefficients. |
| mergeCoeff-class | Class mergeCoeff, a class for storing regression coefficients. |
| mergeCor | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| mergeCor-class | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| mergeData | MergeMaid instance data for merging |
| mergeExpressionSet | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| mergeExpressionSet-class | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| mergeExprs | Merge gene expression data sets |
| mergeget | Merge gene expression data sets |
| modelOutcome | Compare regression coefficients across studies |
| modelOutcome,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| names,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| names<-,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| notes,mergeCor-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| notes,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| notes<-,mergeExpressionSet,ANY-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| pairwise.cors | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| pairwise.cors,mergeCor-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| phenoData,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| phenoData<-,mergeExpressionSet,ANY-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| plot | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| plot,list-method | Class mergeCor, a class for storing data relevant to integrative correlation coefficients. |
| plot,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| sample1 | MergeMaid instance data for merging |
| sample2 | MergeMaid instance data for merging |
| sample3 | MergeMaid instance data for merging |
| show,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| stdcoeff | Class mergeCoeff, a class for storing regression coefficients. |
| stdcoeff,mergeCoeff-method | Class mergeCoeff, a class for storing regression coefficients. |
| stdcoeff<-,mergeCoeff-method | Class mergeCoeff, a class for storing regression coefficients. |
| subsetmES | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| summary,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |
| zscore | Class mergeCoeff, a class for storing regression coefficients. |
| zscore,mergeCoeff-method | Class mergeCoeff, a class for storing regression coefficients. |
| zscore<-,mergeCoeff-method | Class mergeCoeff, a class for storing regression coefficients. |
| [,mergeExpressionSet-method | Class mergeExpressionSet, a class for merged microarray data, and methods for processing them |