| activeModScoreHTML {maigesPack} | R Documentation |
This function takes an object of class maigesActMod,
that is generated using the function activeMod to do
functional classification of gene groups, and save an HTML file with
global score for genes separated by gene groups (modules).
activeModScoreHTML(mod=NULL, dir="./", fileSave="scores")
mod |
object of class maigesActMod, resulted from
functional classification of gene groups. |
dir |
character string giving the folder to save the file. |
fileSave |
string giving the file name. You don't need to put the extension 'html', it will be put automatically. |
This function generates an HTML file and don't return any R value or object.
Gustavo H. Esteves <gesteves@vision.ime.usp.br>
## Loading a little dataset data(gastro) ## Doing functional classification of gene groups for 'Tissue' sample label gastro.mod = activeMod(gastro.summ, sLabelID="Tissue", cutExp=1, cutPhiper=0.05) activeModScoreHTML(gastro.mod)