| spike {CALIB} | R Documentation |
This SpikeList object contains all the spikes in dataset
RG.It is generated by the function
read.spike
from RG and user-specified concentraion file in the CALIB package.
data(spike)
spike is an SpikeList object containing the following list components:
$R,$G,$Rb,$Gb,
$RArea,$GArea,$RConc,$GConc and $genes. It represents two
microarrays and 600 spikes, including 480 calibration controls, 96 ratio
controls and 24 negative controls.
For the source information, see the introduction of dataset RG.
dataset RG.
Engelen, K., Naudts, B., DeMoor, B., Marchal, K. (2006) A calibration method for estimating absolute expression levels from microarray data. Bioinformatics 22: 1251-1258.
Hilson,P.,et al. (2004) Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications. Genome Res. 14, 2176-2189.
data(spike) plotSpikeRG(spike,array=1)