| deDGEList-class {edgeR} | R Documentation |
A simple list-based class for storing results of differential expression analysis for DGE data
Objects of this class contain the following list components:
ps: | list containing estimates of p parameter. |
r: | numeric vector of size parameter (1/phi) where phi is negative binomial dispersion. |
pseudo: | numeric matrix with the pseudo-counts. |
M: | numeric scalar with the library size that pseudo counts are mapped to. |
exact: | numeric vector of exact p-values (unadjusted). |
This class inherits directly from class list so any operation appropriate for lists will work on objects of this class.
deDGEList objects also have a show method.
Mark Robinson