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| AnalyzeTilingCelFiles | Background correction and RNA normalization for CEL files from an Affymetrix tiling array. |
| AssociateWithGenes | Associates a vector of probe positions with the nearest input transcription start site. |
| AssociateWithInterval | Returns index of association between a probe and a set of genomic intervals. |
| Einter | Sample intensities for human promoter tiling array. |
| gene positions | Position of known genes in the first 2 Mb of human chromosome 1-3. |
| intensities | Sample intensities for human promoter tiling array. |
| KG | Position of known genes in the first 2 Mb of human chromosome 1-3. |
| parseBPMAP | Returns information from a BPMAP file for select probes in an Affymetrix tiling array. |
| TilingCelFiles2Probesets | Background correction and RNA normalization for CEL files from an Affymetrix tiling array. |