| cbind {CALIB} | R Documentation |
Combine a series of RGList\_CALIB objects or a series of SpikeList
objects or a series of
ParameterList objects.
## S3 method for class 'RGList_CALIB': cbind(..., deparse.level = 1) ## S3 method for class 'RGList_CALIB': rbind(..., deparse.level = 1)
... |
RGList_CALIB objects, SpikeList objects
or ParameterList objects . |
deparse.level |
see cbind in base package. |
cbind combines data objects assuming the same gene lists but
different arrays. rbind combines data objects assuming
equivalent arrays, i.e., the same RNA targets, but different
genes.
For ParameterList objects, only cbind is available, because it makes
no sense to rbind parameter.
For RGList_CALIB objects and SpikeList objects, cbind and rbind are both
available. For cbind, the matrices of expression data from the
individual objects are cbinded. The data.frames of target information,
if they exist, are rbinded. The combined data object will preserve
any additional components or attributes found in the first object
to be combined. For rbind, the matrices of expression data are
rbinded while the target information, in any, is unchanged.
An RGList_CAILB, a SpikeList or
a ParameterList object holding data from
all the arrays and all genes from the individual objects.
Hui Zhao
cbind in limma package
cbind in the base package
cbind in the limma package
R1 <- G1 <- matrix(1:8,4,2)
rownames(R1) <- rownames(G1) <- c("g1","g2","g3","g4")
colnames(R1) <- colnames(G1) <- c("a1","a2")
RG1 <- new("RGList_CALIB",list(R=R1,G=G1))
R2 <- G2 <- matrix(9:16,4,2)
rownames(R2) <- rownames(G2) <- c("g1","g2","g3","g4")
colnames(R2) <- colnames(G2) <- c("a3","a4")
RG2 <- new("RGList_CALIB",list(R=R2,G=G2))
RG <- cbind(RG1,RG2)