| calcGC |
Calculate GC percent |
| calcGC,character-method |
Calculate GC percent (methods) |
| calcGC,ExpressionSet-method |
Calculate GC percent (methods) |
| calcGC,missing-method |
Calculate GC percent (methods) |
| calcGC,NULL-method |
Calculate GC percent (methods) |
| calcGC-methods |
Calculate GC percent (methods) |
| calcPrototype |
Calculate prototype |
| calcPrototype,ExpressionSet-method |
Calculate prototype (methods) |
| calcPrototype,matrix-method |
Calculate prototype (methods) |
| calcPrototype,missing-method |
Calculate prototype (methods) |
| calcPrototype,vector-method |
Calculate prototype (methods) |
| calcPrototype-methods |
Calculate prototype (methods) |
| calcTm |
Calculate Tm |
| calcTm,character-method |
Calculate Tm (methods) |
| calcTm,ExpressionSet-method |
Calculate Tm (methods) |
| calcTm,missing-method |
Calculate Tm (methods) |
| calcTm,NULL-method |
Calculate Tm (methods) |
| calcTm-methods |
Calculate Tm (methods) |
| combineData |
Combine data |
| combineData,ExpressionSet,missing,missing-method |
Combine data (methods) |
| combineData,ExpressionSet,vector,missing-method |
Combine data (methods) |
| combineData,matrix,vector,matrix-method |
Combine data (methods) |
| combineData,matrix,vector,missing-method |
Combine data (methods) |
| combineData,missing,missing,missing-method |
Combine data (methods) |
| combineData,vector,missing,missing-method |
Combine data (methods) |
| combineData,vector,missing,vector-method |
Combine data (methods) |
| combineData,vector,vector,missing-method |
Combine data (methods) |
| combineData,vector,vector,vector-method |
Combine data (methods) |
| combineData-methods |
Combine data (methods) |
| createWiggle |
Create wiggle track |
| createWiggle,ExpressionSet,matrix-method |
Create wiggle track (methods) |
| createWiggle,ExpressionSet,missing-method |
Create wiggle track (methods) |
| createWiggle,matrix,matrix-method |
Create wiggle track (methods) |
| createWiggle,missing,missing-method |
Create wiggle track (methods) |
| createWiggle,vector,matrix-method |
Create wiggle track (methods) |
| createWiggle-methods |
Create wiggle track (methods) |
| getFeatures |
Get features (methods) |
| getFeatures,AnnotatedDataFrame,missing-method |
Get features (methods) |
| getFeatures,AnnotatedDataFrame,NULL-method |
Get features (methods) |
| getFeatures,AnnotatedDataFrame,vector-method |
Get features (methods) |
| getFeatures,ExpressionSet,missing-method |
Get features (methods) |
| getFeatures,ExpressionSet,NULL-method |
Get features (methods) |
| getFeatures,ExpressionSet,vector-method |
Get features (methods) |
| getFeatures,matrix,vector-method |
Get features (methods) |
| getFeatures,missing,missing-method |
Get features (methods) |
| getFeatures,vector,missing-method |
Get features (methods) |
| getFeatures,vector,NULL-method |
Get features (methods) |
| getFeatures,vector,vector-method |
Get features (methods) |
| getFeatures-methods |
Get features (methods) |
| getSamples |
Get samples |
| getSamples,ExpressionSet,missing-method |
Get samples (methods) |
| getSamples,ExpressionSet,NULL-method |
Get samples (methods) |
| getSamples,ExpressionSet,vector-method |
Get samples (methods) |
| getSamples,matrix,missing-method |
Get samples (methods) |
| getSamples,matrix,NULL-method |
Get samples (methods) |
| getSamples,matrix,vector-method |
Get samples (methods) |
| getSamples,missing,missing-method |
Get samples (methods) |
| getSamples,vector,missing-method |
Get samples (methods) |
| getSamples,vector,NULL-method |
Get samples (methods) |
| getSamples,vector,vector-method |
Get samples (methods) |
| getSamples-methods |
Get samples (methods) |
| plotBins |
Plot bins |
| plotBins,ExpressionSet,ExpressionSet-method |
Plot bins (methods) |
| plotBins,ExpressionSet,missing-method |
Plot bins (methods) |
| plotBins,ExpressionSet,vector-method |
Plot bins (methods) |
| plotBins,matrix,missing-method |
Plot bins (methods) |
| plotBins,missing,missing-method |
Plot bins (methods) |
| plotBins,vector,ExpressionSet-method |
Plot bins (methods) |
| plotBins,vector,missing-method |
Plot bins (methods) |
| plotBins,vector,vector-method |
Plot bins (methods) |
| plotBins-methods |
Plot bins (methods) |
| plotChip |
Plot chip image |
| plotChip,ExpressionSet,ExpressionSet,missing-method |
Plot chip image (methods) |
| plotChip,ExpressionSet,missing,missing-method |
Plot chip image (methods) |
| plotChip,ExpressionSet,vector,missing-method |
Plot chip image (methods) |
| plotChip,matrix,missing,missing-method |
Plot chip image (methods) |
| plotChip,missing,missing,missing-method |
Plot chip image (methods) |
| plotChip,vector,vector,ExpressionSet-method |
Plot chip image (methods) |
| plotChip,vector,vector,vector-method |
Plot chip image (methods) |
| plotChip-methods |
Plot chip image (methods) |
| plotFeature |
Plot feature versus two-color intensity |
| plotFeature,ExpressionSet,missing-method |
Plot feature versus two-color intensity (methods) |
| plotFeature,ExpressionSet,vector-method |
Plot feature versus two-color intensity (methods) |
| plotFeature,matrix,vector-method |
Plot feature versus two-color intensity (methods) |
| plotFeature,missing,missing-method |
Plot feature versus two-color intensity (methods) |
| plotFeature-methods |
Plot feature versus two-color intensity (methods) |
| plotPairs |
Plot tree-pairs |
| plotPairs,ExpressionSet-method |
Plot tree-pairs (methods) |
| plotPairs,matrix-method |
Plot tree-pairs (methods) |
| plotPairs,missing-method |
Plot tree-pairs (methods) |
| plotPairs-methods |
Plot tree-pairs (methods) |
| quantileNormalize |
Quantile normalization |
| quantileNormalize,ExpressionSet,ExpressionSet-method |
Quantile normalization (methods) |
| quantileNormalize,ExpressionSet,missing-method |
Quantile normalization (methods) |
| quantileNormalize,ExpressionSet,vector-method |
Quantile normalization (methods) |
| quantileNormalize,matrix,missing-method |
Quantile normalization (methods) |
| quantileNormalize,missing,missing-method |
Quantile normalization (methods) |
| quantileNormalize,vector,ExpressionSet-method |
Quantile normalization (methods) |
| quantileNormalize,vector,missing-method |
Quantile normalization (methods) |
| quantileNormalize,vector,vector-method |
Quantile normalization (methods) |
| quantileNormalize-methods |
Quantile normalization (methods) |
| readDesign |
Read NimbleGen design files |
| readDesign,character,character,character-method |
Read NimbleGen design files (methods) |
| readDesign,character,character,ExpressionSet-method |
Read NimbleGen design files (methods) |
| readDesign,missing,missing,missing-method |
Read NimbleGen design files (methods) |
| readDesign,vector,missing,missing-method |
Read NimbleGen design files (methods) |
| readDesign,vector,vector,missing-method |
Read NimbleGen design files (methods) |
| readDesign-methods |
Read NimbleGen design files (methods) |
| readPairs |
Read Nimblegen .pair files |
| readPairs,character,character,character-method |
Read Nimblegen .pair files (methods) |
| readPairs,character,character,ExpressionSet-method |
Read Nimblegen .pair files (methods) |
| readPairs,missing,missing,missing-method |
Read Nimblegen .pair files (methods) |
| readPairs,vector,missing,missing-method |
Read Nimblegen .pair files (methods) |
| readPairs,vector,vector,missing-method |
Read Nimblegen .pair files (methods) |
| readPairs-methods |
Read Nimblegen .pair files (methods) |
| readSampleKey |
Read sample key |