| intcorDens {MergeMaid} | R Documentation |
Given a mergeExpressionSet, this function calculates and plots the density function of the approximate integrative correlations, as well as densities for the "null distributions" obtained by randomly permuting sample IDs.
intcorDens(x,method,...)
x |
Object of class mergeExpressionSet. |
method |
The available method to use is "pearson". |
... |
Graphical parameters to be passed to plot. |
Here we use the approximate method to calculate the integrative correlation.
The value is null. Returns a plot.
mergeExpressionSet-class,intCor,modelOutcome
if(require(Biobase) & require(MASS)){
data(mergeData)
merged <-mergeExprs(sample1,sample2,sample3)
intcorDens(merged)
intcorDens(merged,cex.legend=1.5)
intcorDens(merged,lty=2)
}