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| $,tsLib-method | Class for representing a reference library |
| $,tsSample-method | Class for representing samples |
| CDFfiles | Class for representing samples |
| CDFfiles,tsSample-method | Class for representing samples |
| CDFfiles<- | Class for representing samples |
| CDFfiles<-,tsSample-method | Class for representing samples |
| CDFpath | Class for representing samples |
| CDFpath,tsSample-method | Class for representing samples |
| CDFpath<- | Class for representing samples |
| CDFpath<-,tsSample-method | Class for representing samples |
| FAMEoutliers | FAME outlier detection |
| FindPeaks | Extract peaks from chromatogram files |
| ImportFameSettings | Retention time markers settings |
| ImportLibrary | Library import |
| ImportSamples | Sample definitions |
| Intensity | Class for representing MS data |
| Intensity,tsMSdata-method | Class for representing MS data |
| Intensity<- | Class for representing MS data |
| Intensity<-,tsMSdata-method | Class for representing MS data |
| length,tsLib-method | Class for representing a reference library |
| length,tsSample-method | Class for representing samples |
| libData | Class for representing a reference library |
| libData,tsLib-method | Class for representing a reference library |
| libId | Class for representing a reference library |
| libId,tsLib-method | Class for representing a reference library |
| libName | Class for representing a reference library |
| libName,tsLib-method | Class for representing a reference library |
| libName<- | Class for representing a reference library |
| libName<-,tsLib-method | Class for representing a reference library |
| libRI | Class for representing a reference library |
| libRI,tsLib-method | Class for representing a reference library |
| libRI<- | Class for representing a reference library |
| libRI<-,tsLib-method | Class for representing a reference library |
| medianRILib | Median RI library correction |
| medRI | Class for representing a reference library |
| medRI,tsLib-method | Class for representing a reference library |
| medRI<- | Class for representing a reference library |
| medRI<-,tsLib-method | Class for representing a reference library |
| NetCDFPeakFinding | Peak picking algorithm from CDF files |
| peakCDFextraction | NetCDF to R |
| peakFind | Intensities and RI matrices |
| plotAllRIdev | Plot Retention Time Index Deviation |
| plotAllSpectra | Plot a Spectra Comparison |
| plotFAME | Plot a standard marker |
| plotPeak | Plot peaks |
| plotRIdev | Plot Retention Time Index Deviation |
| plotSpectra | Plot a Spectra Comparison |
| Profile | Average the correlating masses for each metabolite |
| ProfileCleanUp | Reduce redundancy of the profile |
| profileInfo | Class for representing a MS profile |
| profileInfo,tsProfile-method | Class for representing a MS profile |
| profileInfo<- | Class for representing a MS profile |
| profileInfo<-,tsProfile-method | Class for representing a MS profile |
| refLib | Class for representing a reference library |
| refLib,tsLib-method | Class for representing a reference library |
| retIndex | Class for representing MS data |
| retIndex,tsMSdata-method | Class for representing MS data |
| retIndex<- | Class for representing MS data |
| retIndex<-,tsMSdata-method | Class for representing MS data |
| retTime | Class for representing MS data |
| retTime,tsMSdata-method | Class for representing MS data |
| retTime<- | Class for representing MS data |
| retTime<-,tsMSdata-method | Class for representing MS data |
| ri2rt | Retention Time Index to Retention Time convertion |
| RIcorrect | Peak picking from CDF files and RI correction |
| RIdev | Class for representing a reference library |
| RIdev,tsLib-method | Class for representing a reference library |
| RIdev<- | Class for representing a reference library |
| RIdev<-,tsLib-method | Class for representing a reference library |
| RIfiles | Class for representing samples |
| RIfiles,tsSample-method | Class for representing samples |
| RIfiles<- | Class for representing samples |
| RIfiles<-,tsSample-method | Class for representing samples |
| rimLimits | Class for representing retention index markers |
| rimLimits,tsRim-method | Class for representing retention index markers |
| rimLimits<- | Class for representing retention index markers |
| rimLimits<-,tsRim-method | Class for representing retention index markers |
| rimMass | Class for representing retention index markers |
| rimMass,tsRim-method | Class for representing retention index markers |
| rimMass<- | Class for representing retention index markers |
| rimMass<-,tsRim-method | Class for representing retention index markers |
| rimStandard | Class for representing retention index markers |
| rimStandard,tsRim-method | Class for representing retention index markers |
| rimStandard<- | Class for representing retention index markers |
| rimStandard<-,tsRim-method | Class for representing retention index markers |
| RIpath | Class for representing samples |
| RIpath,tsSample-method | Class for representing samples |
| RIpath<- | Class for representing samples |
| RIpath<-,tsSample-method | Class for representing samples |
| rt2ri | Retention Time to Retention Time Index convertion |
| sampleData | Class for representing samples |
| sampleData,tsSample-method | Class for representing samples |
| sampleDays | Class for representing samples |
| sampleDays,tsSample-method | Class for representing samples |
| sampleDays<- | Class for representing samples |
| sampleDays<-,tsSample-method | Class for representing samples |
| sampleNames | Class for representing samples |
| sampleNames,tsSample-method | Class for representing samples |
| sampleNames<- | Class for representing samples |
| sampleNames<-,tsSample-method | Class for representing samples |
| sampleRI | Sample especific RI detection |
| selMass | Class for representing a reference library |
| selMass,tsLib-method | Class for representing a reference library |
| selMass<- | Class for representing a reference library |
| selMass<-,tsLib-method | Class for representing a reference library |
| show,tsLib-method | Class for representing a reference library |
| show,tsMSdata-method | Class for representing MS data |
| show,tsProfile-method | Class for representing a MS profile |
| show,tsSample-method | Class for representing samples |
| spectra | Class for representing a reference library |
| spectra,tsLib-method | Class for representing a reference library |
| spectra<- | Class for representing a reference library |
| spectra<-,tsLib-method | Class for representing a reference library |
| TargetSearch | A targeted approach for GC-MS data. |
| topMass | Class for representing a reference library |
| topMass,tsLib-method | Class for representing a reference library |
| topMass<- | Class for representing a reference library |
| topMass<-,tsLib-method | Class for representing a reference library |
| tsLib-class | Class for representing a reference library |
| tsMSdata-class | Class for representing MS data |
| tsProfile-class | Class for representing a MS profile |
| tsRim-class | Class for representing retention index markers |
| tsSample-class | Class for representing samples |
| Write.Results | Save TargetSearch result objects into files |
| [,tsLib-method | Class for representing a reference library |
| [,tsSample-method | Class for representing samples |