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| dualKS-package | Dual KS Discriminant Analysis and Classification |
| class:DKSClassifier | Class to contain gene set signatures. |
| class:DKSGeneScores | Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
| class:DKSGeneSet | Class to contain gene signatures. |
| class:DKSPredicted | Class to contain classification results from dksClassify |
| dks | A demonstration data set for package dualKS. |
| DKSClassifier | Class to contain gene set signatures. |
| DKSClassifier-class | Class to contain gene set signatures. |
| dksClassify | Predict classes for gene expression sets. |
| dksCustomClass | Create a classification object from predefined gene signature. |
| DKSGeneScores | Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
| DKSGeneScores-class | Class to contain dual Kolmogorov Smirnov rank sum discriminant analysis results for gene expression data. |
| DKSGeneSet | Class to contain gene signatures. |
| DKSGeneSet-class | Class to contain gene signatures. |
| dksPerm | Estimate significance of signature scores. |
| DKSPredicted | Class to contain classification results from dksClassify |
| DKSPredicted-class | Class to contain classification results from dksClassify |
| dksSelectGenes | Extract gene signatures from a DKSGeneScores object. |
| dksTrain | Perform Dual KS Discriminant Analysis |
| dksWeights | Calculate gene weights based on average expression. |
| dualKS | Dual KS Discriminant Analysis and Classification |
| eset | A demonstration data set for package dualKS. |
| KS | Calculate Kolmogorov Smirnov rank sum scores. |
| plot,DKSPredicted,missing-method | Class to contain classification results from dksClassify |
| plot,DKSPredicted-method | Class to contain classification results from dksClassify |
| pv.f | A demonstration data set for package dualKS. |
| pvr.f | A demonstration data set for package dualKS. |
| show,DKSPredicted-method | Class to contain classification results from dksClassify |
| summary,DKSPredicted-method | Class to contain classification results from dksClassify |