| SnpLevelSet-class {oligoClasses} | R Documentation |
Virtual class for SNP-level data
A virtual Class: No objects may be created from it.
assayData:assayData:
contains matrices with equal dimensions, and with column number
equal to nrow(phenoData). Class:class.AssayDataphenoData:class.eSetfeatureData:class.eSetexperimentData:class.eSetannotation:class.eSet.__classVersion__:"Versions"
Class eSet, directly.
Class VersionedBiobase, by class "eSet", distance 2.
Class Versioned, by class "eSet", distance 3.
signature(object = "SnpLevelSet"): Accessor for
matrix of genotype callssignature(object = "SnpLevelSet", value =
"matrix"): Replacement method for genotype calls.signature(object = "SnpLevelSet"):
Accessor for matrix of confidence scores for the genotype callssignature(object = "SnpLevelSet",
value = "matrix"): Replacement methodsignature(object = "SnpLevelSet"):
See also chromosomesignature(object = "SnpLevelSet", value =
"character"): See also chromosomesignature(object = "SnpLevelSet"):
Accessor for matrix of confidence scores for the copy number estimates.signature(object = "SnpLevelSet", value
= "matrix"): Replacement method for confidence scores of copy number estimates.signature(x = "SnpLevelSet", y =
"SnpLevelSet"): Useful for combining two objects with the same
phenoData. For instance, combine an object created from the
Hind 50k chip and an object created from the Xba 50k chip.signature(object = "SnpLevelSet"): Accessor
for matrix of copy numbers.signature(object = "SnpLevelSet", value =
"matrix"): Replacement method for copy number matricessignature(object = "SnpLevelSet"): See also dbsignature(object = "SnpLevelSet"): See also positionRS
showClass("SnpLevelSet")