| UCSCTrackModes-class {rtracklayer} | R Documentation |
A vector of view modes ("hide", "dense", "full", "pack", "squish") for each track in a UCSC view.
Objects may be created by calls of the form
ucscTrackModes(object =
character(), hide = character(), dense = character(), pack = character(),
squish = character(), full = character()),
where object should be a character vector of mode names (with
its names attribute specifying the corresponding track names).
The other parameters should contain track names that override the
modes in object.
.Data:"character" holding the
modes ("hide", "dense", "full", "pack", "squish"), with its
names attribute holding corresponding track names.labels:"character" holding
labels (human-readable names) corresponding to each track/mode.
Class "character", from data part.
Class "vector", by class "character", distance 2.
Class "characterORMIAME", by class "character", distance 2.
trackNames(object)trackNames(object) <- valuevalue are set to "full"
if the are currently set to "hide" in this object. Any tracks not
in value are set to "hide". All other modes are preserved.object[i]i, which can be any type of index supported by character
vector subsetting. If i is a character vector, it indexes
first by the internal track IDs (the names on .Data)
and then by the user-level track names (the labels slot).object[i] <- valuei (in the same way as in object[i] above) to those
specified in value.Michael Lawrence
UCSCView on which track view modes may be set.