Package: CB2
Type: Package
Title: CRISPR Pooled Screen Analysis using Beta-Binomial Test
Version: 1.3.6
Date: 2025-10-01
Authors@R: 
  c(person(given = "Hyun-Hwan", family = "Jeong", role = c("aut", "cre"), email = "hyunhwanjeong@icloud.com"))
Description: Provides functions for hit gene identification and quantification of sgRNA (single-guided RNA) abundances for CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) pooled screen data analysis. 
  Details are in Jeong et al. (2019) <doi:10.1101/gr.245571.118> and Baggerly et al. (2003) <doi:10.1093/bioinformatics/btg173>. 
Depends: R (>= 3.5.0)
License: MIT + file LICENSE
LazyData: true
Imports: Rcpp, metap, magrittr, dplyr, tibble, stringr, ggplot2, tidyr,
        glue, pheatmap, tools, readr, parallel, R.utils
LinkingTo: Rcpp, RcppArmadillo
Suggests: testthat, knitr, rmarkdown
RoxygenNote: 7.3.2
Encoding: UTF-8
VignetteBuilder: knitr
NeedsCompilation: yes
Packaged: 2025-10-01 13:13:27 UTC; hyun-hwanjeong
Author: Hyun-Hwan Jeong [aut, cre]
Maintainer: Hyun-Hwan Jeong <hyunhwanjeong@icloud.com>
Repository: CRAN
Date/Publication: 2025-10-01 13:40:12 UTC
Built: R 4.4.3; x86_64-w64-mingw32; 2025-12-22 05:06:05 UTC; windows
Archs: x64
