Last updated on 2024-09-29 05:49:30 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.5.4 | 7.62 | 54.92 | 62.54 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.5.4 | 5.24 | 34.14 | 39.38 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.5.4 | 93.22 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.5.4 | 96.57 | ERROR | |||
| r-devel-windows-x86_64 | 0.5.4 | 9.00 | 63.00 | 72.00 | ERROR | |
| r-patched-linux-x86_64 | 0.5.4 | ERROR | ||||
| r-release-linux-x86_64 | 0.5.4 | 7.35 | 50.98 | 58.33 | OK | |
| r-release-macos-arm64 | 0.5.4 | 29.00 | OK | |||
| r-release-macos-x86_64 | 0.5.4 | 45.00 | OK | |||
| r-release-windows-x86_64 | 0.5.4 | 9.00 | 62.00 | 71.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.5.4 | 30.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.5.4 | 47.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.5.4 | 11.00 | 73.00 | 84.00 | ERROR |
Version: 0.5.4
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
braidReports-package.Rd: braidrm-package
es8analysis.Rd: es8olatmz, runBRAIDanalysis
makeBRAIDreport.Rd: runBRAIDanalysis, scale_fill_gradientn,
geom_point, geom_line
potentiationPlot.Rd: geom_ribbon, geom_point, geom_line, geom_hline
voronoi.Rd: geom_polygon
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.5.4
Check: R code for possible problems
Result: NOTE
calculateIAE: no visible global function definition for ‘evalBRAIDrsm’
makeBRAIDreport: no visible global function definition for
‘evalBRAIDrsm’
makeBRAIDreport: no visible global function definition for
‘calcBRAIDconfint’
makeBRAIDreport : <anonymous>: no visible global function definition
for ‘invertBRAIDrsm’
potentiationPlot: no visible global function definition for
‘calcBRAIDconfint’
potentiationPlot : <anonymous>: no visible global function definition
for ‘evalBRAIDrsm’
potentiationPlot: no visible global function definition for
‘evalBRAIDrsm’
Undefined global functions or variables:
calcBRAIDconfint evalBRAIDrsm invertBRAIDrsm
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.5.4
Check: Rd cross-references
Result: WARN
Missing link or links in Rd file 'braidReports-package.Rd':
‘braidrm-package’
Missing link or links in Rd file 'es8analysis.Rd':
‘es8olatmz’ ‘runBRAIDanalysis’
Missing link or links in Rd file 'makeBRAIDreport.Rd':
‘runBRAIDanalysis’
See section 'Cross-references' in the 'Writing R Extensions' manual.
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
braidReports-package.Rd: braidrm-package
es8analysis.Rd: es8olatmz, runBRAIDanalysis
makeBRAIDreport.Rd: runBRAIDanalysis, scale_fill_gradientn,
geom_point, geom_line
potentiationPlot.Rd: geom_ribbon, geom_point, geom_line, geom_hline
voronoi.Rd: geom_polygon
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 0.5.4
Check: examples
Result: ERROR
Running examples in ‘braidReports-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: calculateIAE
> ### Title: Calculate the Index of Achievable Efficacy
> ### Aliases: calculateIAE
> ### Keywords: misc
>
> ### ** Examples
>
> data(es8analysis)
> bfit <- es8analysis$braidFit
> # Modelled effect is base-10 logarithm of cell survival relative to negative controls,
> # so a level of -2 reflects 99% cell killing
> calculateIAE(bfit$fullpar,c(-1,-2),c(1.015*10^-6,5*10^-5))
Error in evalBRAIDrsm(sc1, sc2, parv) :
could not find function "evalBRAIDrsm"
Calls: calculateIAE
Execution halted
Flavors: r-devel-linux-x86_64-debian-gcc, r-patched-linux-x86_64
Version: 0.5.4
Check: Rd cross-references
Result: WARN
Missing link or links in Rd file 'braidReports-package.Rd':
‘braidrm-package’
Missing link or links in Rd file 'es8analysis.Rd':
‘es8olatmz’ ‘runBRAIDanalysis’
Missing link or links in Rd file 'makeBRAIDreport.Rd':
‘runBRAIDanalysis’
See section 'Cross-references' in the 'Writing R Extensions' manual.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-patched-linux-x86_64, r-release-windows-x86_64
Version: 0.5.4
Check: examples
Result: ERROR
Running examples in ‘braidReports-Ex.R’ failed
The error most likely occurred in:
> ### Name: calculateIAE
> ### Title: Calculate the Index of Achievable Efficacy
> ### Aliases: calculateIAE
> ### Keywords: misc
>
> ### ** Examples
>
> data(es8analysis)
> bfit <- es8analysis$braidFit
> # Modelled effect is base-10 logarithm of cell survival relative to negative controls,
> # so a level of -2 reflects 99% cell killing
> calculateIAE(bfit$fullpar,c(-1,-2),c(1.015*10^-6,5*10^-5))
Error in evalBRAIDrsm(sc1, sc2, parv) :
could not find function "evalBRAIDrsm"
Calls: calculateIAE
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-release-windows-x86_64, r-oldrel-windows-x86_64
Version: 0.5.4
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Rd warning: braidReports-package.Rd:44: missing link ‘braidrm-package’
Rd warning: es8analysis.Rd:6: missing link ‘es8olatmz’
Rd warning: es8analysis.Rd:8: missing link ‘runBRAIDanalysis’
Rd warning: es8analysis.Rd:11: missing link ‘runBRAIDanalysis’
Rd warning: makeBRAIDreport.Rd:16: missing link ‘runBRAIDanalysis’
Rd warning: makeBRAIDreport.Rd:120: missing link ‘runBRAIDanalysis’
Flavor: r-patched-linux-x86_64
Version: 0.5.4
Check: Rd cross-references
Result: WARN
Missing link or links in documentation object 'braidReports-package.Rd':
'braidrm-package'
Missing link or links in documentation object 'es8analysis.Rd':
'es8olatmz' 'runBRAIDanalysis'
Missing link or links in documentation object 'makeBRAIDreport.Rd':
'runBRAIDanalysis'
See section 'Cross-references' in the 'Writing R Extensions' manual.
Flavor: r-oldrel-windows-x86_64