CRAN Package Check Results for Package deconstructSigs

Last updated on 2024-05-06 21:54:18 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.8.0 0.39 2.15 2.54 ERROR
r-devel-linux-x86_64-debian-gcc 1.8.0 2.35 38.56 40.91 NOTE
r-devel-linux-x86_64-fedora-clang 1.8.0 72.84 NOTE
r-devel-linux-x86_64-fedora-gcc 1.8.0 73.34 NOTE
r-devel-windows-x86_64 1.8.0 4.00 62.00 66.00 NOTE
r-patched-linux-x86_64 1.8.0 2.16 49.94 52.10 NOTE
r-release-linux-x86_64 1.8.0 2.21 50.06 52.27 NOTE
r-release-macos-arm64 1.8.0 5.00 ERROR
r-release-macos-x86_64 1.8.0 7.00 ERROR
r-release-windows-x86_64 1.8.0 5.00 63.00 68.00 NOTE
r-oldrel-macos-arm64 1.8.0 6.00 ERROR
r-oldrel-macos-x86_64 1.8.0 7.00 ERROR
r-oldrel-windows-x86_64 1.8.0 6.00 65.00 71.00 OK

Check Details

Version: 1.8.0
Check: package dependencies
Result: ERROR Packages required but not available: 'BSgenome', 'BSgenome.Hsapiens.UCSC.hg19' Package suggested but not available for checking: ‘VariantAnnotation’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-devel-linux-x86_64-debian-clang

Version: 1.8.0
Check: Rd \usage sections
Result: NOTE Documented arguments not in \usage in Rd file 'getTriContextFraction.Rd': ‘trimer.counts.ref’ Documented arguments not in \usage in Rd file 'norm.it.Rd': ‘trimer.counts’ Functions with \usage entries need to have the appropriate \alias entries, and all their arguments documented. The \usage entries must correspond to syntactically valid R code. See chapter ‘Writing R documentation files’ in the ‘Writing R Extensions’ manual. Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64

Version: 1.8.0
Check: package dependencies
Result: ERROR Package required but not available: ‘BSgenome.Hsapiens.UCSC.hg19’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-x86_64

Version: 1.8.0
Check: package dependencies
Result: ERROR Package required but not available: ‘BSgenome.Hsapiens.UCSC.hg19’ Package suggested but not available for checking: ‘VariantAnnotation’ See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’ manual. Flavor: r-oldrel-macos-arm64