Last updated on 2026-01-11 21:49:43 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.61 | 256.29 | 269.90 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.52 | 205.90 | 216.42 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 29.00 | 323.15 | 352.15 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 416.93 | 446.93 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 194.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.99 | 276.36 | 291.35 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.94 | 238.45 | 253.39 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 307.00 | 317.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 190.00 | 210.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 347.00 | 358.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 248.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [99s/261s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.529, system: 0.042, elapsed: 3.015 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.415, system: 0.046, elapsed: 15.824 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.223, system: 0.017, elapsed: 0.877 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.488, system: 0.680, elapsed: 36.906 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.007, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.404, system: 0.820, elapsed: 57.754 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.576, system: 0.033, elapsed: 2.470 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.573, system: 0.096, elapsed: 12.965 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.015, elapsed: 0.609 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.832, system: 0.769, elapsed: 77.184 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.279 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.956, system: 0.940, elapsed: 94.175 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.552, system: 0.037, elapsed: 2.857 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.570, system: 0.076, elapsed: 14.111 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.335, system: 0.017, elapsed: 1.177 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.539, system: 0.651, elapsed: 25.344 seconds]
Computing values for grid cells...
... done. [user: 0.177, system: 0.007, elapsed: 0.244 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.274, system: 0.359, elapsed: 1.123 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.129, system: 1.186, elapsed: 45.869 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.610, system: 0.043, elapsed: 1.811 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.632, system: 0.114, elapsed: 14.207 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.211, system: 0.014, elapsed: 0.366 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.747, system: 0.686, elapsed: 18.976 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.003, elapsed: 0.188 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 12.063, system: 0.708, elapsed: 19.096 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.185, system: 1.603, elapsed: 55.461 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [87s/228s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.617, system: 0.040, elapsed: 4.038 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.592, system: 0.075, elapsed: 23.730 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.017, elapsed: 0.538 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.314, system: 0.435, elapsed: 11.132 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.414 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.473, system: 0.597, elapsed: 41.331 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.035, elapsed: 3.902 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.519, system: 0.060, elapsed: 27.748 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.013, elapsed: 0.674 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.271, system: 0.410, elapsed: 13.521 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.003, elapsed: 0.427 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.300, system: 0.543, elapsed: 47.859 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.030, elapsed: 4.173 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.621, system: 0.068, elapsed: 26.550 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.014, elapsed: 0.510 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.380, system: 0.423, elapsed: 12.367 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.003, elapsed: 0.523 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.214, system: 0.315, elapsed: 2.033 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.856, system: 0.876, elapsed: 48.047 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.586, system: 0.034, elapsed: 4.329 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.629, system: 0.055, elapsed: 26.446 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.203, system: 0.014, elapsed: 0.552 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.259, system: 0.422, elapsed: 12.802 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.477 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.793, system: 0.529, elapsed: 31.513 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 27.329, system: 1.081, elapsed: 78.053 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64