Last updated on 2026-06-02 13:54:55 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 15.83 | 289.83 | 305.66 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 12.35 | 274.83 | 287.18 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 26.00 | 311.45 | 337.45 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 34.00 | 394.08 | 428.08 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 199.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.72 | 335.86 | 351.58 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 17.75 | 324.50 | 342.25 | OK | |
| r-release-macos-arm64 | 1.1.4 | 4.00 | 45.00 | 49.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 613.00 | 623.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 24.00 | 193.00 | 217.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 10.00 | 970.00 | 980.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 27.00 | 244.00 | 271.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [102s/555s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Attaching package: 'data.table'
The following object is masked from 'package:base':
%notin%
Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.559, system: 0.041, elapsed: 2.520 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.514, system: 0.068, elapsed: 14.613 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.018, elapsed: 1.014 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.307, system: 0.828, elapsed: 107.650 seconds]
Computing values for grid cells...
... done. [user: 0.195, system: 0.007, elapsed: 0.191 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.461, system: 0.997, elapsed: 126.918 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.725, system: 0.049, elapsed: 2.162 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.371, system: 0.062, elapsed: 12.732 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.220, system: 0.014, elapsed: 0.324 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 8.311, system: 0.763, elapsed: 63.367 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.005, elapsed: 0.188 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.650, system: 0.962, elapsed: 79.409 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.623, system: 0.044, elapsed: 2.810 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.548, system: 0.059, elapsed: 16.367 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.228, system: 0.014, elapsed: 1.077 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.194, system: 0.819, elapsed: 125.239 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.252 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.269, system: 0.245, elapsed: 1.275 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.721, system: 1.218, elapsed: 148.009 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.514, system: 0.031, elapsed: 2.598 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.613, system: 0.058, elapsed: 14.394 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.229, system: 0.017, elapsed: 1.000 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.188, system: 0.867, elapsed: 131.475 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.002, elapsed: 0.187 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.751, system: 0.641, elapsed: 40.138 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.160, system: 1.642, elapsed: 190.856 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/15m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.14.1, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.581, system: 0.044, elapsed: 4.652 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.750, system: 0.067, elapsed: 23.657 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.020, elapsed: 1.226 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.196, system: 0.977, elapsed: 180.781 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.009, elapsed: 0.470 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.543, system: 1.151, elapsed: 212.087 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.602, system: 0.035, elapsed: 3.953 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.772, system: 0.060, elapsed: 22.345 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.226, system: 0.016, elapsed: 1.196 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.278, system: 0.994, elapsed: 180.043 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.505 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.656, system: 1.142, elapsed: 209.503 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.534, system: 0.032, elapsed: 4.511 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.653, system: 0.049, elapsed: 24.257 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.216, system: 0.018, elapsed: 1.201 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.231, system: 1.020, elapsed: 178.367 seconds]
Computing values for grid cells...
... done. [user: 0.172, system: 0.003, elapsed: 0.408 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.269, system: 0.238, elapsed: 1.739 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.783, system: 1.387, elapsed: 212.174 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.547, system: 0.036, elapsed: 3.898 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.684, system: 0.063, elapsed: 22.029 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.227, system: 0.018, elapsed: 1.180 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.131, system: 0.925, elapsed: 178.432 seconds]
Computing values for grid cells...
... done. [user: 0.191, system: 0.005, elapsed: 0.454 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.523, system: 0.636, elapsed: 51.674 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 31.008, system: 1.714, elapsed: 259.132 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64