Last updated on 2025-09-07 05:48:45 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.11 | 242.53 | 256.64 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.25 | 233.38 | 243.63 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 312.36 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 354.05 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 184.00 | 204.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.82 | 240.60 | 256.42 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.24 | 305.48 | 319.72 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 200.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 189.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 186.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 23.00 | 233.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/137s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.471, system: 0.059, elapsed: 1.835 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.853, system: 0.178, elapsed: 13.405 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.018, elapsed: 0.210 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.816, system: 0.316, elapsed: 5.788 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.009, elapsed: 0.215 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.026, system: 0.615, elapsed: 22.118 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.652, system: 0.086, elapsed: 2.453 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.824, system: 0.255, elapsed: 13.940 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.016, elapsed: 0.369 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.858, system: 0.260, elapsed: 12.433 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.423 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.206, system: 0.656, elapsed: 30.573 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.550, system: 0.050, elapsed: 4.322 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.880, system: 0.191, elapsed: 22.396 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.020, elapsed: 0.327 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.577, system: 0.260, elapsed: 5.144 seconds]
Computing values for grid cells...
... done. [user: 0.145, system: 0.003, elapsed: 0.149 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.058, system: 0.247, elapsed: 0.926 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.015, system: 0.803, elapsed: 34.907 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.531, system: 0.079, elapsed: 2.437 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.840, system: 0.200, elapsed: 13.047 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.016, elapsed: 0.222 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.799, system: 0.308, elapsed: 6.721 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.008, elapsed: 0.304 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.355, system: 0.902, elapsed: 17.166 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.519, system: 1.557, elapsed: 40.727 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [77s/123s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.372, system: 0.052, elapsed: 2.118 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.866, system: 0.202, elapsed: 13.058 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.183, system: 0.018, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.665, system: 0.277, elapsed: 7.522 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.006, elapsed: 0.204 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.774, system: 0.592, elapsed: 24.086 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.542, system: 0.060, elapsed: 2.458 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.853, system: 0.221, elapsed: 12.826 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.018, elapsed: 0.248 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.564, system: 0.231, elapsed: 4.737 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.007, elapsed: 0.197 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.845, system: 0.579, elapsed: 21.232 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.321, system: 0.030, elapsed: 1.373 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 7.715, system: 0.118, elapsed: 8.552 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.018, elapsed: 0.217 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.449, system: 0.256, elapsed: 4.008 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.019, elapsed: 0.196 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.088, system: 0.329, elapsed: 1.121 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.507, system: 0.812, elapsed: 16.133 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.543, system: 0.066, elapsed: 1.838 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.896, system: 0.252, elapsed: 14.317 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.015, elapsed: 0.387 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.492, system: 0.203, elapsed: 6.724 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.006, elapsed: 0.458 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.056, system: 0.604, elapsed: 21.760 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 24.958, system: 1.182, elapsed: 46.565 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64