CRAN Package Check Results for Package plotHMM

Last updated on 2025-12-20 09:49:56 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 2023.8.28 58.23 49.88 108.11 OK
r-devel-linux-x86_64-debian-gcc 2023.8.28 32.67 33.11 65.78 ERROR
r-devel-linux-x86_64-fedora-clang 2023.8.28 137.00 70.25 207.25 ERROR
r-devel-linux-x86_64-fedora-gcc 2023.8.28 98.00 83.53 181.53 ERROR
r-devel-windows-x86_64 2023.8.28 68.00 81.00 149.00 OK
r-patched-linux-x86_64 2023.8.28 52.40 46.40 98.80 OK
r-release-linux-x86_64 2023.8.28 49.60 46.08 95.68 OK
r-release-macos-arm64 2023.8.28 OK
r-release-macos-x86_64 2023.8.28 32.00 47.00 79.00 OK
r-release-windows-x86_64 2023.8.28 64.00 83.00 147.00 OK
r-oldrel-macos-arm64 2023.8.28 OK
r-oldrel-macos-x86_64 2023.8.28 40.00 24.00 64.00 OK
r-oldrel-windows-x86_64 2023.8.28 79.00 101.00 180.00 OK

Check Details

Version: 2023.8.28
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘compare_depmixS4.Rmd’ using knitr --- finished re-building ‘compare_depmixS4.Rmd’ --- re-building ‘multiple_sequences.Rmd’ using knitr Quitting from multiple_sequences.Rmd:17-34 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 4/4 in VECTOR_ELT --- Backtrace: ▆ 1. ├─nb.dt[, `:=`(data.i, rank(position)), keyby = .(profile.id, chromosome)] 2. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'multiple_sequences.Rmd' failed with diagnostics: attempt access index 4/4 in VECTOR_ELT --- failed re-building ‘multiple_sequences.Rmd’ SUMMARY: processing the following file failed: ‘multiple_sequences.Rmd’ Error: Vignette re-building failed. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 2023.8.28
Check: re-building of vignette outputs
Result: ERROR Error(s) in re-building vignettes: --- re-building ‘compare_depmixS4.Rmd’ using knitr --- finished re-building ‘compare_depmixS4.Rmd’ --- re-building ‘multiple_sequences.Rmd’ using knitr Quitting from multiple_sequences.Rmd:17-34 [unnamed-chunk-1] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error in `[.data.table`: ! attempt access index 4/4 in VECTOR_ELT --- Backtrace: ▆ 1. ├─nb.dt[, `:=`(data.i, rank(position)), keyby = .(profile.id, chromosome)] 2. └─data.table:::`[.data.table`(...) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'multiple_sequences.Rmd' failed with diagnostics: attempt access index 4/4 in VECTOR_ELT --- failed re-building ‘multiple_sequences.Rmd’ SUMMARY: processing the following file failed: ‘multiple_sequences.Rmd’ Error: Vignette re-building failed. Execution halted Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc