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Isis::MultivariateStatistics Class Reference

Container of multivariate statistics. More...

#include <MultivariateStatistics.h>

Collaboration diagram for Isis::MultivariateStatistics:
Collaboration graph

Public Member Functions

 MultivariateStatistics ()
 Constructs a Multivariate Statistics object with accumulators and counters set to zero.
 
 ~MultivariateStatistics ()
 Destructs a MultivariateStatistics object.
 
void Reset ()
 Resets all accumulators to zero.
 
void AddData (const double *x, const double *y, const unsigned int count)
 Add two arrays of doubles to the accumulators and counters.
 
void AddData (double x, double y, unsigned int count=1)
 Add an x,y value to the accumulators and counters count times.
 
void RemoveData (const double *x, const double *y, const unsigned int count)
 Remove an array of doubles from the accumulators and counters.
 
Isis::Statistics X () const
 Returns a Stats object for all of the X data fed through the AddData method.
 
Isis::Statistics Y () const
 Returns a Stats object for all of the Y data fed through the AddData method.
 
double SumXY () const
 Returns the sum of x*y for all data given through the AddData method.
 
double Covariance () const
 Computes and returns the covariance between the two data sets If there are no valid data (pixels) then NULL8 is returned.
 
double Correlation () const
 Computes and returns the coefficient of correlation (between -1.0 and 1.0) of the two data sets.
 
void LinearRegression (double &a, double &b) const
 Fits a line

\[ y=A+Bx \]

through the data.

 
BigInt ValidPixels () const
 Returns the number of valid pixels processed.
 
BigInt InvalidPixels () const
 Returns the number of invalid pixels encountered.
 
BigInt TotalPixels () const
 Returns the total number of pixels processed.
 

Private Attributes

Isis::Statistics p_x
 A Statistics object holding x data.
 
Isis::Statistics p_y
 A Statistics object holding y data.
 
double p_sumxy
 The sum of x and y.
 
BigInt p_validPixels
 The number of valid (computed) pixels.
 
BigInt p_invalidPixels
 The number of invalid (ignored) pixels.
 
BigInt p_totalPixels
 The total number of pixels (invalid and valid).
 

Detailed Description

Container of multivariate statistics.

This class is used to accumulate multivariate statisics on two double arrays. In particular, it is highly useful for obtaining the covariance, correlation, and linear regression analysis on the the data. It ignores input values which are Isis special pixel values. That is, if either co-aligned double value is a special pixel then both values are not used in any statistical computation.

See Also
Histogram
Stats
Author
2004-06-08 Jeff Anderson
History:

2005-03-28 Leah Dahmer modified file to support Doxygen documentation.

2005-05-23 Jeff Anderson - Added 2GB+ file support

2012-01-03 Steven Lambright - Added AddData(double, double, unsigned int) for a significant performance improvement and to increase the consistency in the API relative to the Statistics class.

Todo:

This class needs an example.

For the below methods we will need to compute log x, loy y, sumx3, sumx4,sumx2y: void ExponentialRegression (double &a, double &b) const; void PowerRegression (double &a, double &b) const; void parabolicRegression (double &a, double &b, double &c);

Definition at line 65 of file MultivariateStatistics.h.

Constructor & Destructor Documentation

Isis::MultivariateStatistics::MultivariateStatistics ( )

Constructs a Multivariate Statistics object with accumulators and counters set to zero.

Definition at line 36 of file MultivariateStatistics.cpp.

References Reset().

Isis::MultivariateStatistics::~MultivariateStatistics ( )

Destructs a MultivariateStatistics object.

Definition at line 52 of file MultivariateStatistics.cpp.

Member Function Documentation

void Isis::MultivariateStatistics::AddData ( const double *  x,
const double *  y,
const unsigned int  count 
)

Add two arrays of doubles to the accumulators and counters.

This method can be invoked multiple times, for example, once for each line in a cube, before obtaining statistics.

Parameters
xArray of doubles to add.
yArray of doubles to add.
countNumber of doubles to process.

Definition at line 62 of file MultivariateStatistics.cpp.

References Isis::Statistics::AddData(), Isis::IsValidPixel(), p_invalidPixels, p_sumxy, p_totalPixels, p_validPixels, p_x, and p_y.

Referenced by Isis::MaximumCorrelation::MatchAlgorithm().

void Isis::MultivariateStatistics::AddData ( double  x,
double  y,
unsigned int  count = 1 
)

Add an x,y value to the accumulators and counters count times.

This method can be invoked multiple times before obtaining statistics.

Parameters
xx value to add
yy value to add
countNumber of times to add this x,y value

Definition at line 89 of file MultivariateStatistics.cpp.

References Isis::Statistics::AddData(), Isis::IsValidPixel(), p_invalidPixels, p_sumxy, p_totalPixels, p_validPixels, p_x, and p_y.

double Isis::MultivariateStatistics::Correlation ( ) const

Computes and returns the coefficient of correlation (between -1.0 and 1.0) of the two data sets.

This can be used as a goodness-of-fit measurement. The close the correlation is two -1.0 or 1.0 the more likely the data sets are related (and therefore the regression equation is valid).

Returns
The coefficient of correlation. (between -1.0 and 1.0) The closer to 0.0 implies there is less correlation between the data sets. Returns NULL8 if correlation couldn't be computed.

Definition at line 163 of file MultivariateStatistics.cpp.

References Covariance(), p_validPixels, p_x, p_y, and Isis::Statistics::StandardDeviation().

Referenced by Isis::MaximumCorrelation::MatchAlgorithm().

double Isis::MultivariateStatistics::Covariance ( ) const

Computes and returns the covariance between the two data sets If there are no valid data (pixels) then NULL8 is returned.

Returns
Covariance between the two data sets.

Definition at line 146 of file MultivariateStatistics.cpp.

References Isis::Statistics::Average(), p_sumxy, p_validPixels, p_x, p_y, and Isis::Statistics::Sum().

Referenced by Correlation().

BigInt Isis::MultivariateStatistics::InvalidPixels ( ) const

Returns the number of invalid pixels encountered.

Returns
The number of invalid (unprocessed) pixels.

Definition at line 200 of file MultivariateStatistics.cpp.

References p_invalidPixels.

void Isis::MultivariateStatistics::LinearRegression ( double &  a,
double &  b 
) const

Fits a line

\[ y=A+Bx \]

through the data.

Parameters
aThe additive constant A.
bThe additive constant B.

Definition at line 210 of file MultivariateStatistics.cpp.

References _FILEINFO_, p_sumxy, p_validPixels, p_x, p_y, Isis::IException::Programmer, Isis::Statistics::Sum(), and Isis::Statistics::SumSquare().

void Isis::MultivariateStatistics::RemoveData ( const double *  x,
const double *  y,
const unsigned int  count 
)

Remove an array of doubles from the accumulators and counters.

Parameters
xPointer to an array of doubles to remove.
yArray of doubles to add.
countNumber of doubles to process.
Returns
(type)return description
Todo:
The description for param y doesn't make sense here. -Leah

Definition at line 118 of file MultivariateStatistics.cpp.

References _FILEINFO_, Isis::IsValidPixel(), p_invalidPixels, p_sumxy, p_totalPixels, p_validPixels, p_x, p_y, Isis::IException::Programmer, and Isis::Statistics::RemoveData().

void Isis::MultivariateStatistics::Reset ( )

Resets all accumulators to zero.

Definition at line 41 of file MultivariateStatistics.cpp.

References p_invalidPixels, p_sumxy, p_totalPixels, p_validPixels, p_x, p_y, and Isis::Statistics::Reset().

Referenced by MultivariateStatistics().

double Isis::MultivariateStatistics::SumXY ( ) const

Returns the sum of x*y for all data given through the AddData method.

Returns
The sum of x*y for all data.

Definition at line 229 of file MultivariateStatistics.cpp.

References p_sumxy.

BigInt Isis::MultivariateStatistics::TotalPixels ( ) const

Returns the total number of pixels processed.

Returns
The total number of pixel processed (valid and invalid).

Definition at line 180 of file MultivariateStatistics.cpp.

References p_totalPixels.

BigInt Isis::MultivariateStatistics::ValidPixels ( ) const

Returns the number of valid pixels processed.

Only valid pixels are utilized when computing the average, standard deviation, variance, minimum, and maximum.

Returns
The number of valid pixels processed.

Definition at line 191 of file MultivariateStatistics.cpp.

References p_validPixels.

Referenced by Isis::Equalization::calculateStatistics(), Isis::OverlapStatistics::IsValid(), and Isis::MaximumCorrelation::MatchAlgorithm().

Isis::Statistics Isis::MultivariateStatistics::X ( ) const

Returns a Stats object for all of the X data fed through the AddData method.

Returns
A Stats object for all X data.

Definition at line 238 of file MultivariateStatistics.cpp.

References p_x.

Referenced by Isis::Equalization::calculateStatistics().

Isis::Statistics Isis::MultivariateStatistics::Y ( ) const

Returns a Stats object for all of the Y data fed through the AddData method.

Returns
A Stats object for all Y data.

Definition at line 247 of file MultivariateStatistics.cpp.

References p_y.

Referenced by Isis::Equalization::calculateStatistics().

Member Data Documentation

BigInt Isis::MultivariateStatistics::p_invalidPixels
private

The number of invalid (ignored) pixels.

Definition at line 106 of file MultivariateStatistics.h.

Referenced by AddData(), InvalidPixels(), RemoveData(), and Reset().

double Isis::MultivariateStatistics::p_sumxy
private

The sum of x and y.

Definition at line 96 of file MultivariateStatistics.h.

Referenced by AddData(), Covariance(), LinearRegression(), RemoveData(), Reset(), and SumXY().

BigInt Isis::MultivariateStatistics::p_totalPixels
private

The total number of pixels (invalid and valid).

Definition at line 111 of file MultivariateStatistics.h.

Referenced by AddData(), RemoveData(), Reset(), and TotalPixels().

BigInt Isis::MultivariateStatistics::p_validPixels
private

The number of valid (computed) pixels.

Definition at line 101 of file MultivariateStatistics.h.

Referenced by AddData(), Correlation(), Covariance(), LinearRegression(), RemoveData(), Reset(), and ValidPixels().

Isis::Statistics Isis::MultivariateStatistics::p_x
private

A Statistics object holding x data.

Definition at line 91 of file MultivariateStatistics.h.

Referenced by AddData(), Correlation(), Covariance(), LinearRegression(), RemoveData(), Reset(), and X().

Isis::Statistics Isis::MultivariateStatistics::p_y
private

A Statistics object holding y data.

Definition at line 93 of file MultivariateStatistics.h.

Referenced by AddData(), Correlation(), Covariance(), LinearRegression(), RemoveData(), Reset(), and Y().


The documentation for this class was generated from the following files: