See download stats for: Bioconductor software packages Bioconductor experiment packages Bioconductor workflow packages

Download stats for Bioconductor annotation packages

This page was generated on 2024-11-06 10:20:05 -0500 (Wed, 06 Nov 2024).

The number reported next to each package name is the download score, that is, the average number of distinct IPs that “hit” the package each month for the last 12 months (not counting the current month).

Top 30

1	GenomeInfoDbData (54783)
2	GO.db (23109)
3	org.Hs.eg.db (18888)
4	HDO.db (13192)
5	org.Mm.eg.db (8517)
6	TxDb.Hsapiens.UCSC.hg19.knownGene (4936)
7	BSgenome.Hsapiens.UCSC.hg38 (4151)
8	reactome.db (3534)
9	EnsDb.Hsapiens.v86 (3004)
10	BSgenome.Hsapiens.UCSC.hg19 (2930)

11	TxDb.Hsapiens.UCSC.hg38.knownGene (2617)
12	hgu133plus2.db (1902)
13	org.Rn.eg.db (1798)
14	JASPAR2020 (1737)
15	DO.db (1696)
16	FDb.InfiniumMethylation.hg19 (1540)
17	IlluminaHumanMethylation450kanno.ilmn12.hg19 (1520)
18	TxDb.Mmusculus.UCSC.mm10.knownGene (1415)
19	IlluminaHumanMethylation450kmanifest (1321)
20	org.Dm.eg.db (1279)

21	IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1244)
22	BSgenome.Mmusculus.UCSC.mm10 (1240)
23	IlluminaHumanMethylationEPICmanifest (1190)
24	Homo.sapiens (1159)
25	org.Dr.eg.db (1050)
26	HPO.db (1017)
27	SNPlocs.Hsapiens.dbSNP144.GRCh37 (983)
28	hgu133a.db (940)
29	BSgenome.Hsapiens.1000genomes.hs37d5 (930)
30	SNPlocs.Hsapiens.dbSNP155.GRCh37 (929)

All annotation packages

All annotation package stats in one file: annotation_pkg_stats.tab

All annotation package download scores in one file: annotation_pkg_scores.tab

See Download stats for Bioconductor annotation repository (all packages combined)

4

4.10.1 (1)

A

	aads.rnai (1)
	ABAData (1)
	abc (0)
	abc.data (1)
	ABHgenotypeR (1)
	abind (24)
	ace.fma (1)
	acepack (2)
	ACTIONet (1)
	ActivePathways (1)
	actuar (1)
	ada (1)
	adabag (1)
	AdaptGauss (1)
	adbcdrivermanager (1)
	addinslist (1)
	ade4 (4)
	adegenet (1)
	adegraphics (1)
	adehabitat (1)
	adehabitatLT (1)
	adephylo (1)
	ADGofTest (1)
	aditools (1)
	adjustedCurves (1)
	adme16cod (2)
	adme16cod.db (36)
	admiral (2)
	admiral.test (1)
	admiraldev (1)
	admiralonco (1)
	admiralophtha (1)
	admiralroche (1)
	admisc (11)
	ADMM (0)
	adSplit (1)
	AER (1)
	afex (2)
	affxparser (1)
	affy (1)
	affycoretools (1)
	affydata (1)
	affyio (1)
	affyPLM (0)
	ag (2)
	ag.db (36)
	agahomology (2)
	agcdf (30)
	AGHmatrix (0)
	AgiMicroRna (0)
	agprobe (31)
	agricolae (10)
	agridat (1)
	agrmt (1)
	AHCytoBands (18)
	AHEnsDbs (29)
	AHLRBaseDbs (25)
	AHMeSHDbs (28)
	AHPathbankDbs (22)
	AHPubMedDbs (25)
	AHWikipathwaysDbs (20)
	AICcmodavg (1)
	aigoraFitMini (1)
	AIPW (0)
	airr (1)
	airway (1)
	akima (1)
	alabama (0)
	alakazam (1)
	ald (0)
	ALDEx2 (1)
	aldvmm (1)
	alembic (0)
	AlgDesign (3)
	alkahest.generic (0)
	ALL (10)
	alluvial (0)
	almanac (0)
	alphahull (0)
	AlphaMissense.v2023.hg19 (16)
	AlphaMissense.v2023.hg38 (19)
	alphashape3d (0)
	alphavantager (1)
	alr3 (1)
	alr4 (0)
	alsace (1)
	altair (1)
	altdoc (1)
	alternativeSplicingEvents.hg19 (24)
	alternativeSplicingEvents.hg38 (24)
	amap (1)
	AMARETTO (0)
	ambient (0)
	Amelia (2)
	AmesHousing (0)
	amgen.okta.client (1)
	amgsafetyvis (1)
	amlogger (1)
	ANCOMBC (1)

	ANCOMBCs (1)
	angrycell (1)
	AnimalINLA (1)
	animation (1)
	annaffy (1)
	anndata (1)
	AnnoProbe (1)
	annotables (1)
	annotate (2)
	AnnotationDbi (23)
	AnnotationFilter (1)
	AnnotationForge (1)
	AnnotationHub (3)
	AnnotationHubData (1)
	annotatr (0)
	anopheles.db0 (42)
	anRichment (0)
	antaresProcessing (1)
	anticlust (1)
	AnVIL (0)
	anytime (5)
	aod (2)
	apcluster (1)
	APCtools (1)
	ape (53)
	apeglm (1)
	apex (2)
	apexcharter (0)
	APL (1)
	apLCMS (1)
	aplot (55)
	appgen (1)
	aqp (1)
	arabidopsis.db0 (48)
	archive (2)
	ArchR (0)
	argparse (13)
	argparser (1)
	argus.DS.Credentials (3)
	argusDS.apc.utils (3)
	argusDS.backtesting.engine (3)
	argusDS.data (3)
	argusDS.data.engineering (1)
	argusDS.data.preparation (1)
	argusDS.data.preparation2 (4)
	argusDS.data.visualisation (1)
	argusDS.database (2)
	argusDS.DataValidation (1)
	argusDS.DB.manager.utilities (1)
	argusDS.distributions (1)
	argusDS.driver.importance (2)
	argusDS.FCUtilities (1)
	argusDS.FZ.SourceData (1)
	argusDS.FZ.utils (1)
	argusDS.gamboostLSS (1)
	argusDS.gamlss.distributions (1)
	argusDS.gamlss.forecast (3)
	argusDS.gamlss.modelling (3)
	argusDS.gamlss.smoothers (1)
	argusDS.gamlss.testing (3)
	argusDS.gamlss.utils (2)
	argusDS.GlobalSettings (1)
	argusDS.model.testing (1)
	argusDS.model.tools (3)
	argusDS.model.validation (1)
	argusDS.modeldb (1)
	argusDS.possibility.curves.daily (1)
	argusDS.PossibilityCurves.db.utils (2)
	argusDS.PossibilityCurves.utils (1)
	argusDS.S3 (2)
	argusDS.shiny.utils (1)
	argusDS.signal.backtesting (1)
	argusDS.signal.dataprep (2)
	argusDS.signal.generation (1)
	argusDS.smoothers (1)
	argusDS.spread.trading.utils (2)
	argusDS.Studio.APC (1)
	argusDS.Studio.FC (1)
	argusDS.studio.ml (1)
	argusDS.studio.model.utils (1)
	argusDS.Studio.MyStudio (2)
	argusDS.Studio.permissions (3)
	argusDS.Studio.utils (3)
	argusDS.tabulator (3)
	argusDS.trading.optimization (1)
	argusDS.trading.performance (1)
	argusDS.TradingSignals (1)
	argusDS.UI (2)
	argusDS.utilities (1)
	aricode (1)
	arm (5)
	aroma.affymetrix (7)
	aroma.apd (8)
	aroma.core (8)
	aroma.light (1)
	ArrayExpress (1)
	arrayhelpers (1)
	arrayop (1)
	arrow (25)

	arsenal (1)
	arules (3)
	arulesViz (1)
	ArvadosR (1)
	arvupload (1)
	ASCAT (1)
	ascend (1)
	ascii (1)
	asciicast (1)
	ASExtras4 (0)
	AsgntDAMacro (1)
	ash (6)
	ashr (2)
	asht (1)
	AsioHeaders (5)
	askpass (181)
	ASMap (1)
	asremlPlus (1)
	assert (0)
	assertive (1)
	assertive.base (1)
	assertive.code (1)
	assertive.data (1)
	assertive.data.uk (1)
	assertive.data.us (1)
	assertive.datetimes (1)
	assertive.files (1)
	assertive.matrices (1)
	assertive.models (1)
	assertive.numbers (1)
	assertive.properties (10)
	assertive.reflection (1)
	assertive.sets (1)
	assertive.strings (1)
	assertive.types (10)
	assertr (3)
	assertthat (2)
	ASSET (0)
	AssotesteR (0)
	astsa (1)
	async (1)
	ATACseqQC (1)
	ATE (1)
	atgenomeatrefseq (1)
	atgenomeatrefseq7cdf (1)
	atgenomeatrefseq7probe (1)
	atgenomeatrefseqcdf (1)
	atgenomeatrefseqprobe (1)
	atgenomeattair (1)
	atgenomeattaircdf (1)
	atgenomeattairprobe (1)
	atgenomeattigr (1)
	atgenomeattigr7cdf (1)
	atgenomeattigr7probe (1)
	atgenomeattigrcdf (1)
	atgenomeattigrprobe (1)
	ath1121501 (2)
	ath1121501.db (67)
	ath1121501cdf (62)
	ath1121501frmavecs (10)
	ath1121501probe (36)
	ath1atrefseq (1)
	ath1atrefseq7cdf (1)
	ath1atrefseq7probe (1)
	ath1atrefseqcdf (1)
	ath1atrefseqprobe (1)
	ath1attair (2)
	ath1attaircdf (1)
	ath1attairprobe (1)
	ath1attigr (1)
	ath1attigr7cdf (1)
	ath1attigr7probe (1)
	ath1attigrcdf (1)
	ath1attigrprobe (1)
	athhomology (2)
	ATR (0)
	attachment (4)
	attempt (1)
	AUC (1)
	AUCell (1)
	audio (2)
	audited (1)
	auth0 (1)
	av (1)
	ava2 (2)
	avengeme (1)
	aws (2)
	aws.ec2metadata (0)
	aws.s3 (6)
	aws.signature (6)
	awsMethods (1)
	azcore (1)
	Azimuth (1)
	AzureAuth (2)
	AzureGraph (6)
	AzureRMR (6)
	AzureStor (1)

B

	b64 (1)
	babelgene (6)
	babelmixr2 (1)
	babelwhale (0)
	babynames (0)
	backbone (0)
	backports (120)
	badger (0)
	badminton (1)
	baguette (0)
	bain (1)
	BalancedSampling (0)
	ballgown (0)
	bambu (0)
	BANDITS (0)
	barley1cdf (32)
	barley1probe (31)
	BART (0)
	bartMachine (0)
	bartMachineJARs (0)
	base (1)
	base2grob (1)
	base64 (3)
	base64enc (2)
	base64url (1)
	basefun (0)
	basemaps (1)
	BASiCS (1)
	basilisk (1)
	basilisk.utils (1)
	batchelor (1)
	BatchJobs (1)
	batchtools (1)
	battenberg (1)
	Battenberg (1)
	BayesFactor (2)
	BayesFM (1)
	bayesm (7)
	BayesMendel (1)
	bayesmeta (0)
	bayesplot (13)
	BayesPostEst (1)
	bayesQR (0)
	bayestestR (10)
	BayesX (0)
	baySeq (3)
	BB (1)
	BBmisc (1)
	bbmle (15)
	bbotk (1)
	bbr (1)
	bbr.bayes (1)
	bccaEndometrial (1)
	bcellViper (0)
	bcp (1)
	BDAtemplates (1)
	bdsmatrix (16)
	BE (1)
	beachmat (2)
	beadarray (1)
	beanplot (1)
	beaver (1)
	beepr (2)
	beeswarm (1)
	bench (0)
	benchmarkme (1)
	benchmarkmeData (0)
	benchr (0)
	bernor (1)
	berryFunctions (1)
	Bessel (1)
	bestglm (1)
	bestNormalize (2)
	betareg (1)
	bettermc (1)
	bezier (0)
	BFpack (1)
	BgeeDB (1)
	BGLR (1)
	bgs.ggtheme (1)
	bgs.hephaistos (1)
	bgs.hermes (1)
	BH (234)
	BIApylon (1)
	BiasedUrn (13)
	BIAutils (1)
	bib2df (1)
	bibtex (2)
	biclust (0)
	BICseq (1)
	BIEN (1)
	bife (0)
	biganalytics (0)
	bigassertr (1)
	bigD (0)
	bigdist (0)
	BIGL (1)
	biglasso (0)
	biglm (4)
	biglmm (1)
	bigmemory (3)
	bigmemory.sri (3)
	bigparallelr (0)
	bigreadr (1)
	bigrquery (15)
	bigsnpr (0)
	bigsparser (1)
	bigstatsr (1)
	bigutils (0)
	bigutilsr (0)
	billboarder (11)
	binb (1)
	bindr (1)
	bindrcpp (1)
	binGroup (0)
	binman (2)
	binom (0)
	binr (0)
	bio3d (5)
	biobank (1)
	Biobase (10)
	BioBase (1)
	bioc::GenomeInfoDbData (0)
	BiocBaseUtils (1)
	BiocCheck (1)
	BiocFileCache (5)
	BiocFileCaches (1)
	BiocGenerics (19)
	BiocInstaller (1)
	BiocIO (2)
	BiocManager (316)
	BiocNeighbors (3)
	Bioconductor (1)

	bioconductor (0)
	BiocParallel (19)
	BiocSingular (2)
	BiocSklearn (0)
	BiocStyle (1)
	BiocVersion (23)
	biocViews (1)
	BiocWorkflowTools (0)
	BiodiversityR (1)
	BioEnricher (1)
	BioGenerics (1)
	Biogenerics (1)
	BioInstaller (1)
	BioManager (1)
	biomaRt (2)
	BioMartGOGeneSets (29)
	biomartr (1)
	biomformat (1)
	biomod2 (1)
	BioNet (1)
	biostat3 (1)
	biostatR (0)
	biostatUtil (0)
	Biostring (1)
	Biostrings (17)
	biotools (1)
	BioVersion (1)
	biovizBase (1)
	BiplotML (1)
	bit (81)
	bit64 (40)
	bitops (79)
	bizdays (2)
	bkbutils (1)
	BlakerCI (0)
	blastula (1)
	blavaan (1)
	blme (7)
	blob (69)
	blockcluster (1)
	blockCV (1)
	blockForest (1)
	blockmodeling (1)
	blogdown (0)
	BloodCancerMultiOmics2017 (1)
	bluster (1)
	BlythStillCasellaCI (1)
	BMA (1)
	bmcite.SeuratData (1)
	BMisc (0)
	bmm (1)
	bmp (0)
	bmspal (1)
	bnlearn (2)
	BOIN (0)
	bold (2)
	bookdown (40)
	Boom (1)
	boomer (1)
	BoomSpikeSlab (1)
	boot (84)
	bootstrap (0)
	botor (0)
	bovine.db (37)
	bovine.db0 (55)
	bovinecdf (34)
	bovineprobe (36)
	box (10)
	box.linters (1)
	BPCells (1)
	bpcp (1)
	BPSC (1)
	bRacatus (1)
	BradleyTerry2 (0)
	brave (0)
	brew (58)
	brglm (1)
	brglm2 (1)
	bricks (0)
	brickster (0)
	BridgeDbR (1)
	bridgesampling (0)
	brio (179)
	brms (1)
	brmsmargins (0)
	Brobdingnag (1)
	broman (1)
	broom (125)
	broom.helpers (14)
	broom.mixed (1)
	broomExtra (1)
	BrowserViz (0)
	bs4Dash (11)
	bseqsc (1)
	BSgenome (3)
	BSGenome (0)
	bsgenome (1)
	BSgenome.Alyrata.JGI.v1 (29)
	BSgenome.Amellifera.BeeBase.assembly4 (35)
	BSgenome.Amellifera.NCBI.AmelHAv3.1 (20)
	BSgenome.Amellifera.UCSC.apiMel2 (43)
	BSgenome.Amellifera.UCSC.apiMel2.masked (24)
	BSgenome.Aofficinalis.NCBI.V1 (21)
	BSgenome.Athaliana.TAIR.01222004 (8)
	BSgenome.Athaliana.TAIR.04232008 (37)
	BSgenome.Athaliana.TAIR.TAIR9 (75)
	BSgenome.Btaurus.UCSC.bosTau3 (60)
	BSgenome.Btaurus.UCSC.bosTau3.masked (27)
	BSgenome.Btaurus.UCSC.bosTau4 (53)
	BSgenome.Btaurus.UCSC.bosTau4.masked (25)
	BSgenome.Btaurus.UCSC.bosTau6 (88)
	BSgenome.Btaurus.UCSC.bosTau6.masked (76)
	BSgenome.Btaurus.UCSC.bosTau8 (32)
	BSgenome.Btaurus.UCSC.bosTau9 (43)
	BSgenome.Btaurus.UCSC.bosTau9.masked (20)
	BSgenome.Carietinum.NCBI.v1 (23)
	BSgenome.Celegans.UCSC.ce10 (71)
	BSgenome.Celegans.UCSC.ce11 (168)
	BSgenome.Celegans.UCSC.ce2 (373)
	BSgenome.Celegans.UCSC.ce6 (37)
	BSgenome.Cfamiliaris.UCSC.canFam2 (44)
	BSgenome.Cfamiliaris.UCSC.canFam2.masked (24)
	BSgenome.Cfamiliaris.UCSC.canFam3 (57)
	BSgenome.Cfamiliaris.UCSC.canFam3.masked (26)
	BSgenome.Cjacchus.UCSC.calJac3 (22)
	BSgenome.Cjacchus.UCSC.calJac4 (37)
	BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1 (18)
	BSgenome.Creinhardtii.JGI.v5.6 (26)
	BSgenome.Dmelanogaster.BDGP.Release5 (1)
	BSgenome.Dmelanogaster.FlyBase.r51 (1)
	BSgenome.Dmelanogaster.UCSC.dm2 (64)
	BSgenome.Dmelanogaster.UCSC.dm2.masked (23)
	BSgenome.Dmelanogaster.UCSC.dm3 (263)

	BSgenome.Dmelanogaster.UCSC.dm3.masked (26)
	BSgenome.Dmelanogaster.UCSC.dm6 (216)
	BSgenome.Drerio.UCSC.danRer10 (155)
	BSgenome.Drerio.UCSC.danRer11 (64)
	BSgenome.Drerio.UCSC.danRer5 (41)
	BSgenome.Drerio.UCSC.danRer5.masked (23)
	BSgenome.Drerio.UCSC.danRer6 (40)
	BSgenome.Drerio.UCSC.danRer6.masked (23)
	BSgenome.Drerio.UCSC.danRer7 (343)
	BSgenome.Drerio.UCSC.danRer7.masked (23)
	BSgenome.Dvirilis.Ensembl.dvircaf1 (18)
	BSgenome.Ecoli.NCBI.20080805 (222)
	BSgenome.Gaculeatus.UCSC.gasAcu1 (42)
	BSgenome.Gaculeatus.UCSC.gasAcu1.masked (22)
	BSgenome.Ggallus.ENSEMBL.galGal6 (0)
	BSgenome.Ggallus.UCSC.galGal3 (118)
	BSgenome.Ggallus.UCSC.galGal3.masked (23)
	BSgenome.Ggallus.UCSC.galGal4 (40)
	BSgenome.Ggallus.UCSC.galGal4.masked (23)
	BSgenome.Ggallus.UCSC.galGal5 (24)
	BSgenome.Ggallus.UCSC.galGal6 (41)
	BSgenome.Gmax.NCBI.Gmv40 (20)
	BSgenome.Hsapiens.1000genomes.hs37d5 (930)
	BSgenome.Hsapiens.1000genomes.hs38d5 (1)
	BSgenome.Hsapiens.1000genomes.hs3d5 (0)
	BSgenome.Hsapiens.NCBI.b36v3 (1)
	BSgenome.Hsapiens.NCBI.GRCh38 (780)
	BSgenome.Hsapiens.NCBI.T2T.CHM13v2.0 (83)
	BSgenome.Hsapiens.UCSC.hg1 (0)
	BSgenome.Hsapiens.UCSC.hg16 (1)
	BSgenome.Hsapiens.UCSC.hg17 (56)
	BSgenome.Hsapiens.UCSC.hg17.masked (33)
	BSgenome.Hsapiens.UCSC.hg18 (275)
	BSgenome.Hsapiens.UCSC.hg18.masked (67)
	BSgenome.Hsapiens.UCSC.hg19 (2930)
	bsgenome.hsapiens.ucsc.hg19 (1)
	BSgenome.Hsapiens.UCSC.hg19.masked (163)
	BSgenome.Hsapiens.UCSC.hg38 (4151)
	BSgenome.Hsapiens.UCSC.hg38.dbSNP151.major (29)
	BSgenome.Hsapiens.UCSC.hg38.dbSNP151.minor (28)
	BSgenome.Hsapiens.UCSC.hg38.masked (204)
	BSgenome.Hsapiens.UCSC.hs1 (33)
	BSgenome.Hsapiens.UCSC.mm10 (0)
	BSgenome.Mdomestica.UCSC.monDom5 (20)
	BSgenome.Mfascicularis.NCBI.5.0 (42)
	BSgenome.Mfascicularis.NCBI.6.0 (22)
	BSgenome.Mfuro.UCSC.musFur1 (25)
	BSgenome.Mmul10.SIVmac251 (0)
	BSgenome.Mmulatta.NCBI.mmul10.tmp (0)
	BSgenome.Mmulatta.UCSC.rheMac10 (164)
	BSgenome.Mmulatta.UCSC.rheMac2 (40)
	BSgenome.Mmulatta.UCSC.rheMac2.masked (25)
	BSgenome.Mmulatta.UCSC.rheMac3 (40)
	BSgenome.Mmulatta.UCSC.rheMac3.masked (27)
	BSgenome.Mmulatta.UCSC.rheMac8 (98)
	BSgenome.Mmusculus.UCSC.hg38 (0)
	BSgenome.Mmusculus.UCSC.mm10 (1240)
	Bsgenome.Mmusculus.UCSC.mm10 (0)
	BSgenome.Mmusculus.UCSC.mm10.masked (72)
	BSgenome.Mmusculus.UCSC.mm19 (1)
	BSgenome.Mmusculus.UCSC.mm1z (1)
	BSgenome.Mmusculus.UCSC.mm39 (141)
	BSgenome.Mmusculus.UCSC.mm6 (1)
	BSgenome.Mmusculus.UCSC.mm7 (2)
	BSgenome.Mmusculus.UCSC.mm8 (142)
	BSgenome.Mmusculus.UCSC.mm8.masked (131)
	BSgenome.Mmusculus.UCSC.mm9 (368)
	BSgenome.Mmusculus.UCSC.mm9.masked (52)
	BSgenome.Oaries.ENSEMBL.RambV2 (1)
	BSgenome.Omela.CUSTOM.oenMel1.1 (0)
	BSgenome.Osativa.MSU.MSU7 (50)
	BSgenome.Ppaniscus.UCSC.panPan1 (19)
	BSgenome.Ppaniscus.UCSC.panPan2 (28)
	BSgenome.Ptroglodytes.UCSC.panTro2 (44)
	BSgenome.Ptroglodytes.UCSC.panTro2.masked (24)
	BSgenome.Ptroglodytes.UCSC.panTro3 (37)
	BSgenome.Ptroglodytes.UCSC.panTro3.masked (31)
	BSgenome.Ptroglodytes.UCSC.panTro5 (26)
	BSgenome.Ptroglodytes.UCSC.panTro6 (23)
	BSgenome.Rnorvegicus.UCSC.rn4 (72)
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	hs133ahsugprobe (2)
	hs133ahsvegae (1)
	hs133ahsvegaecdf (1)
	hs133ahsvegaeprobe (1)
	hs133ahsvegag (1)
	hs133ahsvegagcdf (1)
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	hs133ahsvegat (1)
	hs133ahsvegatcdf (1)
	hs133ahsvegatprobe (1)
	hs133aptense (2)
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	hs133aptensecdf (1)
	hs133aptenseprobe (2)
	hs133aptensg (2)
	hs133aptensg7cdf (1)
	hs133aptensg7probe (1)
	hs133aptensgcdf (2)
	hs133aptensgprobe (2)
	hs133aptenst (1)
	hs133aptenstcdf (1)
	hs133aptenstprobe (2)
	hs133aptentrezg (1)
	hs133aptentrezgcdf (1)
	hs133aptentrezgprobe (1)
	hs133aptrefseq (1)
	hs133aptrefseqcdf (1)
	hs133aptrefseqprobe (1)
	hs133av2hsense (1)
	hs133av2hsense7cdf (1)
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	hs133av2hsensecdf (2)
	hs133av2hsenseprobe (2)
	hs133av2hsensg (1)
	hs133av2hsensg7cdf (1)
	hs133av2hsensg7probe (1)
	hs133av2hsensgcdf (1)
	hs133av2hsensgprobe (1)
	hs133av2hsenst (1)
	hs133av2hsenst7cdf (1)
	hs133av2hsenst7probe (1)
	hs133av2hsenstcdf (1)
	hs133av2hsenstprobe (1)
	hs133av2hsentrezg (1)
	hs133av2hsentrezg7cdf (1)
	hs133av2hsentrezg7probe (1)
	hs133av2hsentrezgcdf (1)
	hs133av2hsentrezgprobe (1)
	hs133av2hsrefseq (1)
	hs133av2hsrefseq7cdf (1)
	hs133av2hsrefseq7probe (1)
	hs133av2hsrefseqcdf (1)
	hs133av2hsrefseqprobe (1)
	hs133av2hsug (2)
	hs133av2hsug7cdf (1)
	hs133av2hsug7probe (1)
	hs133av2hsugcdf (1)
	hs133av2hsugprobe (1)

	hs133av2hsvegae (1)
	hs133av2hsvegaecdf (1)
	hs133av2hsvegaeprobe (1)
	hs133av2hsvegag (1)
	hs133av2hsvegagcdf (1)
	hs133av2hsvegagprobe (1)
	hs133av2hsvegat (1)
	hs133av2hsvegatcdf (1)
	hs133av2hsvegatprobe (1)
	hs133av2ptense (1)
	hs133av2ptense7cdf (1)
	hs133av2ptense7probe (1)
	hs133av2ptensecdf (1)
	hs133av2ptenseprobe (1)
	hs133av2ptensg (1)
	hs133av2ptensg7cdf (1)
	hs133av2ptensg7probe (1)
	hs133av2ptensgcdf (1)
	hs133av2ptensgprobe (1)
	hs133av2ptenst (1)
	hs133av2ptenstcdf (1)
	hs133av2ptenstprobe (1)
	hs133av2ptentrezg (2)
	hs133av2ptentrezgcdf (1)
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	hs133av2ptrefseq (1)
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	hs133bhsense (2)
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	hs133bhsensecdf (1)
	hs133bhsenseprobe (1)
	hs133bhsensg (2)
	hs133bhsensg7cdf (1)
	hs133bhsensg7probe (1)
	hs133bhsensgcdf (2)
	hs133bhsensgprobe (2)
	hs133bhsenst (1)
	hs133bhsenst7cdf (1)
	hs133bhsenst7probe (1)
	hs133bhsenstcdf (2)
	hs133bhsenstprobe (2)
	hs133bhsentrezg (2)
	hs133bhsentrezg7cdf (1)
	hs133bhsentrezg7probe (1)
	hs133bhsentrezgcdf (1)
	hs133bhsentrezgprobe (1)
	hs133bhsrefseq (2)
	hs133bhsrefseq7cdf (1)
	hs133bhsrefseq7probe (1)
	hs133bhsrefseqcdf (2)
	hs133bhsrefseqprobe (2)
	hs133bhsug (1)
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	hs133bhsug7probe (1)
	hs133bhsugcdf (2)
	hs133bhsugprobe (1)
	hs133bhsvegae (1)
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	hs133bhsvegaeprobe (1)
	hs133bhsvegag (1)
	hs133bhsvegagcdf (1)
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	hs133bhsvegat (1)
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	hs133bptense (2)
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	hs133bptensecdf (2)
	hs133bptenseprobe (1)
	hs133bptensg (2)
	hs133bptensg7cdf (1)
	hs133bptensg7probe (1)
	hs133bptensgcdf (1)
	hs133bptensgprobe (2)
	hs133bptenst (1)
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	hs133bptentrezg (2)
	hs133bptentrezgcdf (2)
	hs133bptentrezgprobe (1)
	hs133bptrefseq (1)
	hs133bptrefseqcdf (1)
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	hs133phsense (1)
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	hs133phsensecdf (1)
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	hs133phsensg (2)
	hs133phsensg7cdf (1)
	hs133phsensg7probe (1)
	hs133phsensgcdf (1)
	hs133phsensgprobe (1)
	hs133phsenst (1)
	hs133phsenst7cdf (1)
	hs133phsenst7probe (1)
	hs133phsenstcdf (1)
	hs133phsenstprobe (1)
	hs133phsentrezg (1)
	hs133phsentrezg7cdf (1)
	hs133phsentrezg7probe (1)
	hs133phsentrezgcdf (1)
	hs133phsentrezgprobe (1)
	hs133phsrefseq (1)
	hs133phsrefseq7cdf (1)
	hs133phsrefseq7probe (1)
	hs133phsrefseqcdf (2)
	hs133phsrefseqprobe (1)
	hs133phsug (2)
	hs133phsug7cdf (1)
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	hs133phsugprobe (2)
	hs133phsvegae (1)
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	hs133phsvegag (1)
	hs133phsvegagcdf (1)
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	hs133phsvegat (1)
	hs133phsvegatcdf (1)
	hs133phsvegatprobe (1)
	hs133pptense (2)
	hs133pptense7cdf (1)
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	hs133pptensecdf (2)
	hs133pptenseprobe (2)
	hs133pptensg (1)
	hs133pptensg7cdf (1)
	hs133pptensg7probe (1)
	hs133pptensgcdf (1)
	hs133pptensgprobe (1)
	hs133pptenst (2)
	hs133pptenstcdf (2)
	hs133pptenstprobe (1)
	hs133pptentrezg (1)
	hs133pptentrezgcdf (2)
	hs133pptentrezgprobe (2)
	hs133pptrefseq (1)
	hs133pptrefseqcdf (2)
	hs133pptrefseqprobe (1)
	hs133xhsense (2)
	hs133xhsense7cdf (1)
	hs133xhsense7probe (1)
	hs133xhsensecdf (2)
	hs133xhsenseprobe (2)
	hs133xhsensg (1)
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	hs133xhsensg7probe (1)
	hs133xhsensgcdf (2)
	hs133xhsensgprobe (1)
	hs133xhsenst (2)
	hs133xhsenst7cdf (1)
	hs133xhsenst7probe (1)
	hs133xhsenstcdf (2)
	hs133xhsenstprobe (2)
	hs133xhsentrezg (2)
	hs133xhsentrezg7cdf (1)
	hs133xhsentrezg7probe (1)
	hs133xhsentrezgcdf (2)
	hs133xhsentrezgprobe (1)
	hs133xhsrefseq (1)
	hs133xhsrefseq7cdf (1)
	hs133xhsrefseq7probe (1)
	hs133xhsrefseqcdf (1)
	hs133xhsrefseqprobe (1)
	hs133xhsug (2)
	hs133xhsug7cdf (1)
	hs133xhsug7probe (1)
	hs133xhsugcdf (1)
	hs133xhsugprobe (2)
	hs133xhsvegae (1)
	hs133xhsvegaecdf (1)
	hs133xhsvegaeprobe (1)
	hs133xhsvegag (1)
	hs133xhsvegagcdf (1)
	hs133xhsvegagprobe (1)
	hs133xhsvegat (1)
	hs133xhsvegatcdf (1)
	hs133xhsvegatprobe (1)
	hs133xptense (1)
	hs133xptense7cdf (1)
	hs133xptense7probe (1)
	hs133xptensecdf (2)
	hs133xptenseprobe (1)
	hs133xptensg (2)
	hs133xptensg7cdf (1)
	hs133xptensg7probe (1)
	hs133xptensgcdf (2)
	hs133xptensgprobe (1)
	hs133xptenst (2)
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	hs133xptenstprobe (2)
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	hs133xptentrezgcdf (2)
	hs133xptentrezgprobe (2)
	hs133xptrefseq (1)
	hs133xptrefseqcdf (1)
	hs133xptrefseqprobe (1)
	hs25kresogen (1)
	hs25kresogen.db (32)
	Hs6UG171.db (31)
	hs95av2hsense (1)
	hs95av2hsense7cdf (1)
	hs95av2hsense7probe (1)
	hs95av2hsensecdf (1)
	hs95av2hsenseprobe (2)
	hs95av2hsensg (2)
	hs95av2hsensg7cdf (1)
	hs95av2hsensg7probe (1)
	hs95av2hsensgcdf (2)
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	hs95av2hsenst (1)
	hs95av2hsenst7cdf (1)
	hs95av2hsenst7probe (1)
	hs95av2hsenstcdf (1)
	hs95av2hsenstprobe (1)
	hs95av2hsentrezg (1)
	hs95av2hsentrezg7cdf (1)
	hs95av2hsentrezg7probe (1)
	hs95av2hsentrezgcdf (1)
	hs95av2hsentrezgprobe (1)
	hs95av2hsrefseq (1)
	hs95av2hsrefseq7cdf (1)
	hs95av2hsrefseq7probe (1)
	hs95av2hsrefseqcdf (2)
	hs95av2hsrefseqprobe (1)
	hs95av2hsug (1)
	hs95av2hsug7cdf (1)
	hs95av2hsug7probe (1)
	hs95av2hsugcdf (2)
	hs95av2hsugprobe (1)
	hs95av2hsvegae (1)
	hs95av2hsvegaecdf (1)
	hs95av2hsvegaeprobe (1)
	hs95av2hsvegag (1)
	hs95av2hsvegagcdf (1)
	hs95av2hsvegagprobe (1)
	hs95av2hsvegat (1)
	hs95av2hsvegatcdf (1)
	hs95av2hsvegatprobe (1)
	hs95av2ptense (1)
	hs95av2ptense7cdf (1)
	hs95av2ptense7probe (1)
	hs95av2ptensecdf (2)
	hs95av2ptenseprobe (1)
	hs95av2ptensg (1)

	hs95av2ptensg7cdf (1)
	hs95av2ptensg7probe (1)
	hs95av2ptensgcdf (2)
	hs95av2ptensgprobe (1)
	hs95av2ptenst (1)
	hs95av2ptenstcdf (1)
	hs95av2ptenstprobe (1)
	hs95av2ptentrezg (1)
	hs95av2ptentrezgcdf (2)
	hs95av2ptentrezgprobe (2)
	hs95av2ptrefseq (1)
	hs95av2ptrefseqcdf (1)
	hs95av2ptrefseqprobe (1)
	HsAgilentDesign026652.db (62)
	hsahomology (2)
	HsapiensGenome.hg16 (1)
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	HsapiensGenome.hg18 (1)
	HSAUR2 (0)
	HSAUR3 (1)
	hsex10stv2hsense (1)
	hsex10stv2hsense7cdf (1)
	hsex10stv2hsense7probe (1)
	hsex10stv2hsensecdf (1)
	hsex10stv2hsenseprobe (1)
	hsex10stv2hsensg (1)
	hsex10stv2hsensg7cdf (1)
	hsex10stv2hsensg7probe (1)
	hsex10stv2hsensgcdf (1)
	hsex10stv2hsensgprobe (1)
	hsex10stv2hsenst (1)
	hsex10stv2hsenst7cdf (1)
	hsex10stv2hsenst7probe (1)
	hsex10stv2hsenstcdf (1)
	hsex10stv2hsenstprobe (2)
	hsex10stv2hsentrezg (1)
	hsex10stv2hsentrezg7cdf (1)
	hsex10stv2hsentrezg7probe (1)
	hsex10stv2hsentrezgcdf (1)
	hsex10stv2hsentrezgprobe (1)
	hsex10stv2hsrefseq (1)
	hsex10stv2hsrefseq7cdf (1)
	hsex10stv2hsrefseq7probe (1)
	hsex10stv2hsrefseqcdf (1)
	hsex10stv2hsrefseqprobe (1)
	hsex10stv2hsug (1)
	hsex10stv2hsug7cdf (1)
	hsex10stv2hsug7probe (1)
	hsex10stv2hsugcdf (1)
	hsex10stv2hsugprobe (1)
	hsex10stv2ptense (1)
	hsex10stv2ptense7cdf (1)
	hsex10stv2ptense7probe (1)
	hsex10stv2ptensecdf (1)
	hsex10stv2ptenseprobe (1)
	hsex10stv2ptensg (1)
	hsex10stv2ptensg7cdf (1)
	hsex10stv2ptensg7probe (1)
	hsex10stv2ptensgcdf (1)
	hsex10stv2ptensgprobe (1)
	hsex10stv2ptenst (1)
	hsex10stv2ptenstcdf (1)
	hsex10stv2ptenstprobe (1)
	hsex10stv2ptentrezg (1)
	hsex10stv2ptentrezgcdf (1)
	hsex10stv2ptentrezgprobe (1)
	hsfocushsense (1)
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	hsfocushsensecdf (1)
	hsfocushsenseprobe (1)
	hsfocushsensg (1)
	hsfocushsensg7cdf (1)
	hsfocushsensg7probe (1)
	hsfocushsensgcdf (1)
	hsfocushsensgprobe (1)
	hsfocushsenst (1)
	hsfocushsenst7cdf (1)
	hsfocushsenst7probe (1)
	hsfocushsenstcdf (1)
	hsfocushsenstprobe (1)
	hsfocushsentrezg (1)
	hsfocushsentrezg7cdf (1)
	hsfocushsentrezg7probe (1)
	hsfocushsentrezgcdf (1)
	hsfocushsentrezgprobe (2)
	hsfocushsrefseq (2)
	hsfocushsrefseq7cdf (1)
	hsfocushsrefseq7probe (1)
	hsfocushsrefseqcdf (2)
	hsfocushsrefseqprobe (1)
	hsfocushsug (1)
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	hsfocusptense (1)
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	hsfocusptentrezg (1)
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	hsfocusptrefseq (1)
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	hsm (0)
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	hta20probeset.db (28)
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	hta20sttranscriptcluster.db (2)
	hta20transcriptcluster.db (56)
	hthgu133a.db (94)
	hthgu133acdf (39)
	hthgu133afrmavecs (21)
	hthgu133aprobe (33)
	hthgu133b.db (32)
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	htmg430a.db (18)
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	htmlTable (43)
	htmltools (390)
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	httpuv (367)
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	hu35ksubd (3)
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	hu6800 (2)
	hu6800.db (292)
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	huex.1.0.st.v2frmavecs (32)
	huex10stprobeset.db (27)
	huex10sttranscriptcluster.db (44)
	HuExExonProbesetLocation (31)
	HuExExonProbesetLocationHg18 (26)
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	huge (0)
	hugene.1.0.st.v1frmavecs (23)
	hugene10st.db (1)
	hugene10stprobeset.db (44)
	hugene10sttranscriptcluster.db (571)
	hugene10stv1.r3cdf (1)
	hugene10stv1cdf (115)
	hugene10stv1probe (41)
	hugene11stprobeset.db (48)
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	hugene20stprobeset.db (36)
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	human.db0 (101)
	human1mduov3bCrlmm (32)
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	human370v1cCrlmm (193)
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	hypred (1)

I

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	IlluminaHumanMethylation450k.db (21)
	IlluminaHumanMethylation450kanno.ilm10b4.hg19 (1)
	IlluminaHumanMethylation450kanno.ilmn12.hg19 (1520)
	IlluminaHumanMethylation450kannotation.ilmn.v1.2 (3)
	IlluminaHumanMethylation450kmanifest (1321)
	IlluminaHumanMethylation450kprobe (34)
	IlluminaHumanMethylationEPICanno.ilm10b2.hg19 (331)
	IlluminaHumanMethylationEPICanno.ilm10b3.hg19 (39)
	IlluminaHumanMethylationEPICanno.ilm10b4.hg19 (1244)
	IlluminaHumanMethylationEPICmanifest (1190)
	IlluminaHumanMethylationEPICv2anno.20a1.hg38 (113)
	IlluminaHumanMethylationEPICv2manifest (89)
	IlluminaHumanMethylationMSAanno.ilm10a1.hg38 (1)
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O

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	org.MeSH.Pto.db (4)
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	org.Mm.cross.db (1)
	org.Mm.eg.db (8517)
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	Orthology.eg.db (126)
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	overlapping (0)

P

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	pd.081229.hg18.promoter.medip.hx1 (29)
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	pd.hg18.60mer.expr (55)
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	pd.ht.hg.u133.plus.pm (39)
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	pd.hta.2.0 (88)
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	pd.hugene.1.0.st.v1 (242)
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	pd.hxta.2.0 (0)
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	pd.mapping250k.nsp (208)
	pd.mapping250k.sty (205)
	pd.mapping50k.hind240 (217)
	pd.mapping50k.xba240 (240)
	pd.margene.1.0.st (28)
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	pd.mg.u74av2 (32)
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	pd.mg.u74bv2 (29)
	pd.mg.u74c (28)
	pd.mg.u74cv2 (31)
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	pd.moe430a (34)
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	pd.moex.1.0.st.v1 (51)
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	pd.mogene.2.0.st (60)
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	pd.mouse430.2 (53)
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	pd.mta.1.0 (42)
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	pd.rae230a (29)
	pd.rae230b (28)
	pd.raex.1.0.st.v1 (37)
	pd.ragene.1.0.st.v1 (37)
	pd.ragene.1.1.st.v1 (41)
	pd.ragene.2.0.st (29)
	pd.ragene.2.1.st (31)
	pd.rat230.2 (51)
	pd.rcngene.1.0.st (22)
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	pd.rg.u34a (32)
	pd.rg.u34b (27)
	pd.rg.u34c (28)
	pd.rhegene.1.0.st (59)
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	pd.rjpgene.1.0.st (31)
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	TxDb.Athaliana.BioMart.plantsmart51 (33)
	TxDb.Btaurus.UCSC.bosTau8.refGene (24)
	TxDb.Btaurus.UCSC.bosTau9.refGene (26)
	TxDb.Celegans.UCSC.ce11.ensGene (148)
	TxDb.Celegans.UCSC.ce11.refGene (47)
	TxDb.Celegans.UCSC.ce6.ensGene (296)
	TxDb.Cfamiliaris.UCSC.canFam3.refGene (24)
	TxDb.Cfamiliaris.UCSC.canFam4.refGene (16)
	TxDb.Cfamiliaris.UCSC.canFam5.refGene (16)
	TxDb.Cfamiliaris.UCSC.canFam6.refGene (12)
	TxDb.Dmelanogaster.UCSC.dm3.ensGene (577)
	TxDb.Dmelanogaster.UCSC.dm6.ensGene (321)
	txdb.dmelanogaster.ucsc.dm6.ensgene (0)
	TxDb.Drerio.UCSC.danRer10.refGene (119)
	TxDb.Drerio.UCSC.danRer11.refGene (36)
	TxDb.Ggallus.UCSC.galGal4.refGene (22)
	TxDb.Ggallus.UCSC.galGal5.refGene (45)
	TxDb.Ggallus.UCSC.galGal6.refGene (24)
	TxDb.Hsapiens.BioMart.igis (25)
	TxDb.Hsapiens.UCSC.hg18.knownGene (595)
	TxDb.Hsapiens.UCSC.hg19.knownGene (4936)
	TxDb.Hsapiens.UCSC.hg19.lincRNAsTranscripts (161)
	TxDb.Hsapiens.UCSC.hg38.knownGene (2617)
	Txdb.Hsapiens.UCSC.hg38.knownGene (0)
	TxDb.Hsapiens.UCSC.hg38.refGene (87)
	TxDb.Mmulatta.UCSC.rheMac10.refGene (109)
	TxDb.Mmulatta.UCSC.rheMac3.refGene (21)
	TxDb.Mmulatta.UCSC.rheMac8.refGene (22)
	TxDb.Mmusculus.BioMart.igis (0)
	TxDb.Mmusculus.UCSC.mm10.ensGene (123)
	TxDb.Mmusculus.UCSC.mm10.knownGene (1415)
	TxDb.Mmusculus.UCSC.mm39.knownGene (124)
	TxDb.Mmusculus.UCSC.mm39.refGene (124)
	TxDb.Mmusculus.UCSC.mm9.knownGene (642)
	TxDb.Ptroglodytes.UCSC.panTro4.refGene (21)
	TxDb.Ptroglodytes.UCSC.panTro5.refGene (18)
	TxDb.Ptroglodytes.UCSC.panTro6.refGene (18)
	TxDb.Rnorvegicus.BioMart.igis (25)
	TxDb.Rnorvegicus.UCSC.rn4.ensGene (305)
	TxDb.Rnorvegicus.UCSC.rn5.refGene (163)
	TxDb.Rnorvegicus.UCSC.rn6.ncbiRefSeq (17)
	TxDb.Rnorvegicus.UCSC.rn6.refGene (139)
	TxDb.Rnorvegicus.UCSC.rn7.refGene (111)
	TxDb.Scerevisiae.UCSC.sacCer2.ensGene (1)
	TxDb.Scerevisiae.UCSC.sacCer2.sgdGene (28)
	TxDb.Scerevisiae.UCSC.sacCer3.sgdGene (91)
	TxDb.Sscrofa.UCSC.susScr11.refGene (28)
	TxDb.Sscrofa.UCSC.susScr3.refGene (21)
	txdbmaker (1)
	tximeta (1)
	tximport (1)
	tximportDat (0)
	tximportData (0)
	txtq (1)
	tzdb (57)

U

V

	V8 (64)
	validate (1)
	valr (1)
	VAM (1)
	vaplot (0)
	variables (0)
	variancePartition (1)
	VariantAnnotation (1)
	VariantWarehouseBMS (1)
	varImp (0)
	vars (1)
	vaultr (1)
	VBsparsePCA (0)
	vcd (5)
	vcdExtra (1)
	vcfR (2)
	vcr (0)
	vctrs (270)
	vdbR (0)
	vdiffr (2)

	vegan (30)
	vegawidget (1)
	velocyto.R (1)
	vembedr (0)
	vendormetadatahelpers (0)
	venn (9)
	VennDiagram (2)
	venneuler (1)
	vetiver (1)
	VGAM (18)
	VGAMextra (1)
	vhydeg (0)
	VIM (1)
	vimp (1)
	VineCopula (0)
	vioplot (1)
	vip (1)
	viper (1)
	vipor (22)
	viridis (220)

	viridisLite (82)
	viridislite (0)
	visdat (1)
	visNetwork (4)
	visOmopResults (1)
	visR (1)
	vistime (31)
	vitae (1)
	vitisviniferacdf (30)
	vitisviniferaprobe (31)
	vpc (0)
	vroom (160)
	vscDebugger (1)
	vsn (1)
	vvgrapevvtigr (1)
	vvgrapevvtigr7cdf (1)
	vvgrapevvtigr7probe (1)
	vvgrapevvtigrcdf (1)
	vvgrapevvtigrprobe (1)
	vvihomology (2)

W

	WA43966.shareR.3043877 (1)
	waddR (0)
	waffle (1)
	waiter (11)
	wakefield (0)
	waldo (201)
	wallace (1)
	warp (18)
	wateRmelon (1)
	waved (1)
	waveslim (1)
	wdm (0)
	wdman (2)
	webchem (1)
	webdriver (0)
	webfakes (1)
	WebGestaltR (1)
	webmockr (0)
	webp (1)
	webshot (32)
	webshot2 (3)
	websocket (13)

	webutils (2)
	WeightIt (2)
	weights (3)
	WES.1KG.WUGSC (1)
	wesanderson (1)
	WGCNA (14)
	WGScan (0)
	wheatcdf (33)
	wheatmap (1)
	wheatprobe (28)
	whereami (0)
	whisker (32)
	whitening (0)
	whoami (1)
	WibiR (1)
	widgetframe (1)
	widgetTools (1)
	WikidataQueryServiceR (0)
	WikidataR (1)
	WikipediR (5)
	wikitaxa (1)
	wildmeta (0)

	winboxr (1)
	WISP (1)
	withr (348)
	wk (50)
	wkb (1)
	worcs (1)
	wordcloud (0)
	wordcloud2 (0)
	workflowr (1)
	workflows (14)
	workflowsets (15)
	WorldFlora (1)
	worm.db0 (45)
	worrms (2)
	wrapr (1)
	Wrench (0)
	writexl (29)
	WriteXLS (5)
	wrMisc (1)
	WRS2 (2)

X

Y

Z

	zCompositions (11)
	zeallot (0)
	zebrafish (3)
	zebrafish.db (34)
	zebrafish.db0 (48)
	zebrafishcdf (35)

	zebrafishprobe (32)
	zellkonverter (1)
	zelusutils (1)
	zen4R (1)
	zenith (1)
	zinbwave (1)

	zingeR (1)
	zip (195)
	Ziploc (1)
	zlibbioc (4)
	zmahomology (2)
	zoo (34)

Stats generated by https://github.com/Bioconductor/download_stats/