gnu.lists
Class SubSequence

java.lang.Object
  gnu.lists.AbstractSequence
      gnu.lists.SubSequence

All Implemented Interfaces:

Consumable, Sequence, java.lang.Iterable, java.util.Collection, java.util.List

Direct Known Subclasses:

SubCharSeq

public class SubSequence
extends AbstractSequence
implements Sequence

A sequence consisting of a sub-range of the elements of a base sequence. The start and end positions are positions triples (on the same sequence).

Field Summary

Fields inherited from interface gnu.lists.Sequence

ATTRIBUTE_VALUE, BOOLEAN_VALUE, CDATA_VALUE, CHAR_VALUE, COMMENT_VALUE, DOCUMENT_VALUE, DOUBLE_VALUE, ELEMENT_VALUE, EOF_VALUE, eofValue, FLOAT_VALUE, INT_S16_VALUE, INT_S32_VALUE, INT_S64_VALUE, INT_S8_VALUE, INT_U16_VALUE, INT_U32_VALUE, INT_U64_VALUE, INT_U8_VALUE, OBJECT_VALUE, PRIM_VALUE, PROCESSING_INSTRUCTION_VALUE, TEXT_BYTE_VALUE

Constructor Summary

SubSequence()

SubSequence(AbstractSequence base)

SubSequence(AbstractSequence base, int startPos, int endPos)

Method Summary

void	clear()
int	compare(int ipos1, int ipos2) Compare two positions, and indicate their relative order.
int	createPos(int offset, boolean isAfter) Generate a position at a given index.
int	createRelativePos(int pos, int offset, boolean isAfter)
void	finalize()
java.lang.Object	get(int index) See java.util.List.
protected int	getIndexDifference(int ipos1, int ipos0) Get offset of (ipos1) relative to (ipos0).
int	getNextKind(int ipos)
java.lang.Object	getPosNext(int ipos) Get the element following the specified position.
java.lang.Object	getPosPrevious(int ipos) Get the element before the specified position.
protected boolean	isAfterPos(int ipos) Tests whether the position has the "isAfter" property.
protected int	nextIndex(int ipos) Get the offset from the beginning corresponding to a position cookie.
void	releasePos(int ipos) Reclaim any resources used by the given position int.
void	removePosRange(int istart, int iend) Remove a range where each end-point is a position in a container.
int	size() See java.util.List.

Methods inherited from class gnu.lists.AbstractSequence

add, add, addAll, addAll, addPos, compare, compare, consume, consumeNext, consumePosRange, contains, containsAll, copyPos, elements, endPos, equals, equals, fill, fill, fillPosRange, firstAttributePos, firstChildPos, firstChildPos, fromEndIndex, get, getAttribute, getAttributeLength, getContainingSequenceSize, getEffectiveIndex, getIterator, getIterator, getIteratorAtPos, getLowBound, getNextTypeName, getNextTypeObject, getSize, gotoAttributesStart, gotoChildrenStart, gotoParent, hashCode, hasNext, hasPrevious, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, nextIndex, nextMatching, nextPos, parentPos, previousPos, rank, remove, remove, removeAll, removePos, retainAll, set, set, setPosNext, setPosPrevious, stableCompare, startPos, subList, subSequence, subSequencePos, toArray, toArray, toString, toString, unsupported, unsupportedException

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface gnu.lists.Sequence

elements, fill, isEmpty, set

Methods inherited from interface java.util.List

add, add, addAll, addAll, contains, containsAll, equals, hashCode, indexOf, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, retainAll, subList, toArray, toArray

Methods inherited from interface gnu.lists.Consumable

consume

Constructor Detail

SubSequence

public SubSequence()

SubSequence

public SubSequence(AbstractSequence base,
                   int startPos,
                   int endPos)

SubSequence

public SubSequence(AbstractSequence base)

Method Detail

get

public java.lang.Object get(int index)

Description copied from class: AbstractSequence

See java.util.List.

Specified by:

get in interface Sequence

Specified by:

get in interface java.util.List

Specified by:

get in class AbstractSequence

size

public int size()

Description copied from class: AbstractSequence

See java.util.List.

Specified by:

size in interface Sequence

Specified by:

size in interface java.util.Collection

Specified by:

size in interface java.util.List

Specified by:

size in class AbstractSequence

removePosRange

public void removePosRange(int istart,
                           int iend)

Description copied from class: AbstractSequence

Remove a range where each end-point is a position in a container.

Overrides:

removePosRange in class AbstractSequence

Parameters:

istart - start of range, as a poistion

iend - end of range

isAfterPos

protected boolean isAfterPos(int ipos)

Description copied from class: AbstractSequence

Tests whether the position has the "isAfter" property. I.e. if something is inserted at the position, will the iterator end up being after the new data?

Overrides:

isAfterPos in class AbstractSequence

createPos

public int createPos(int offset,
                     boolean isAfter)

Description copied from class: AbstractSequence

Generate a position at a given index. The result is a position cookie that must be free'd with releasePos.

Specified by:

createPos in class AbstractSequence

Parameters:

offset - offset from beginning of desired position

isAfter - should the position have the isAfter property

createRelativePos

public int createRelativePos(int pos,
                             int offset,
                             boolean isAfter)

Overrides:

createRelativePos in class AbstractSequence

getIndexDifference

protected int getIndexDifference(int ipos1,
                                 int ipos0)

Description copied from class: AbstractSequence

Get offset of (ipos1) relative to (ipos0).

Overrides:

getIndexDifference in class AbstractSequence

releasePos

public void releasePos(int ipos)

Description copied from class: AbstractSequence

Reclaim any resources used by the given position int.

Overrides:

releasePos in class AbstractSequence

Parameters:

ipos - the Pos being free'd.

nextIndex

protected int nextIndex(int ipos)

Description copied from class: AbstractSequence

Get the offset from the beginning corresponding to a position cookie.

Overrides:

nextIndex in class AbstractSequence

compare

public int compare(int ipos1,
                   int ipos2)

Description copied from class: AbstractSequence

Compare two positions, and indicate their relative order.

Overrides:

compare in class AbstractSequence

getPosNext

public java.lang.Object getPosNext(int ipos)

Description copied from class: AbstractSequence

Get the element following the specified position.

Overrides:

getPosNext in class AbstractSequence

Parameters:

ipos - the specified position.

Returns:

the following element, or eofValue if there is none. Called by SeqPosition.getNext.

getNextKind

public int getNextKind(int ipos)

Overrides:

getNextKind in class AbstractSequence

getPosPrevious

public java.lang.Object getPosPrevious(int ipos)

Description copied from class: AbstractSequence

Get the element before the specified position.

Overrides:

getPosPrevious in class AbstractSequence

Parameters:

ipos - the specified position.

Returns:

the following element, or eofValue if there is none.

clear

public void clear()

Specified by:

clear in interface java.util.Collection

Specified by:

clear in interface java.util.List

Overrides:

clear in class AbstractSequence

finalize

public void finalize()

Overrides:

finalize in class java.lang.Object